RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 RAB14P61106 215 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 RPL32P62910 135 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 MRPL52Q86TS9 123 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 GATD1Q8NB37 220 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 RAB24Q969Q5 203 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 MED9Q9NWA0 146 aa3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 CHTOPQ9Y3Y2 248 aaKnown RBP3.4□□□□□ -1.86
SCAMP1-206ENST00000618166 BORCS7-ASMTA0A0B4J1R7 106 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 S100A1P23297 94 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 ATP6V0CP27449 155 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 CBLN2Q8IUK8 224 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 TPPP3Q9BW30 176 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 HIGD2AQ9BW72 106 aa3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 RNASE7Q9H1E1 156 aaKnown RBP3.39□□□□□ -1.87
SCAMP1-206ENST00000618166 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 SDHAF1A6NFY7 115 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 C9JQL5 133 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 CXCL1P09341 107 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 STAG3L2P0CL84 134 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 STAG3L3P0CL85 134 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 CCL20P78556 96 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 MOBPQ13875 183 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 ZNF726P1Q15940 193 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 Q6ZUT4 128 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 TMEM242Q9NWH2 141 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 ZFP30Q9Y2G7 519 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 A0A1B0GV50 99 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 C20orf202A1L168 122 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 LTAP01374 205 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 FAM213BQ8TBF2 198 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
SCAMP1-206ENST00000618166 IGLV9-49A0A0B4J1Y8 123 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 A6NN06 94 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 ADCYAP1P18509 176 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 FAM210AQ96ND0 272 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 TMEM126AQ9H061 195 aa3.37□□□□□ -1.87
SCAMP1-206ENST00000618166 TMEM218A2RU14 115 aa3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 PMCHP20382 165 aa3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 CDC34P49427 236 aaPredicted RBP3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 SFT2D1Q8WV19 159 aa3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 MBD3L1Q8WWY6 194 aa3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 PSMG3Q9BT73 122 aaPredicted RBP3.36□□□□□ -1.87
SCAMP1-206ENST00000618166 UMAD1C9J7I0 102 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 I3L3M4 83 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 M0R378 163 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 IGLC6P0CF74 106 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 UBE2G1P62253 170 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 SERF2P84101 59 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 C10orf91Q5T1B1 145 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 AKR1C8PQ5T2L2 129 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 FMC1Q96HJ9 113 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SCAMP1-206ENST00000618166 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
SCAMP1-206ENST00000618166 A0A1W2PRE2 83 aa3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 APOC3P02656 99 aa3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 SRP19P09132 144 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 SPRR2DP22532 72 aa3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 FAM104AQ969W3 186 aa3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.88
SCAMP1-206ENST00000618166 C7orf77A4D0Y5 90 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 MAP1LC3B2A6NCE7 125 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 HIST1H2BAQ96A08 127 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 GNB1LQ9BYB4 327 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 MAP1LC3BQ9GZQ8 125 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
SCAMP1-206ENST00000618166 IGLV5-37A0A075B6J1 123 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 FAM74A7A6NL05 159 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 F8W036 122 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 TRGC1P0CF51 173 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 PEA15Q15121 130 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 FAM74A3Q4VXF1 159 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 SEC11CQ9BY50 192 aa3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 ACTR3CQ9C0K3 210 aaPredicted RBP3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 EIF5A2Q9GZV4 153 aaKnown RBP3.32□□□□□ -1.88
SCAMP1-206ENST00000618166 PAGE4O60829 102 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 CXorf1O96002 111 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 MBP02144 154 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 AKR1C3P42330 323 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 TIMM17AQ99595 171 aa3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-206ENST00000618166 NPSP0C0P6 89 aa3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 CEBPGP53567 150 aa3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 NKX6-2Q9C056 277 aaPredicted RBP3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 GEMIN7Q9H840 131 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 CSDC2Q9Y534 153 aaKnown RBP3.3□□□□□ -1.88
SCAMP1-206ENST00000618166 GAGE2AQ6NT46 116 aa3.29□□□□□ -1.88
SCAMP1-206ENST00000618166 HRCT1Q6UXD1 115 aa3.29□□□□□ -1.88
SCAMP1-206ENST00000618166 SVBPQ8N300 66 aa3.29□□□□□ -1.88
SCAMP1-206ENST00000618166 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
SCAMP1-206ENST00000618166 SNAPINO95295 136 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms