RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 UBE2D1P51668 147 aa15.79■□□□□ 0.12
PMS1-220ENST00000618056 TOMM6Q96B49 74 aa15.79■□□□□ 0.12
PMS1-220ENST00000618056 VCX2Q9H322 139 aa15.79■□□□□ 0.12
PMS1-220ENST00000618056 PRO1933Q9H354 126 aa15.79■□□□□ 0.12
PMS1-220ENST00000618056 PLAC8Q9NZF1 115 aa15.79■□□□□ 0.12
PMS1-220ENST00000618056 SPAG11BQ08648 103 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 Q6ZRU5 148 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 CAMK2N2Q96S95 79 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 TIMM17AQ99595 171 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 A0A087WZ39 114 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 A0A096LNI7 61 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 IGKV2-24A0A0C4DH68 120 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 LINC00474Q9P2X8 69 aa15.78■□□□□ 0.12
PMS1-220ENST00000618056 PAPPA-AS1Q5QFB9 102 aa15.77■□□□□ 0.11
PMS1-220ENST00000618056 ORAOV1Q8WV07 137 aa15.77■□□□□ 0.11
PMS1-220ENST00000618056 F8WDY8 70 aa15.76■□□□□ 0.11
PMS1-220ENST00000618056 MAJINQ3KP22 176 aa15.76■□□□□ 0.11
PMS1-220ENST00000618056 LINC01549A6NIU2 74 aa15.75■□□□□ 0.11
PMS1-220ENST00000618056 RPL37AP61513 92 aaKnown RBP15.75■□□□□ 0.11
PMS1-220ENST00000618056 ZC2HC1BQ5TFG8 222 aa15.75■□□□□ 0.11
PMS1-220ENST00000618056 H0Y8G0 127 aa15.74■□□□□ 0.11
PMS1-220ENST00000618056 ERASQ7Z444 233 aa15.74■□□□□ 0.11
PMS1-220ENST00000618056 FAM19A3Q7Z5A8 133 aa15.74■□□□□ 0.11
PMS1-220ENST00000618056 IFI27L1Q96BM0 104 aa15.74■□□□□ 0.11
PMS1-220ENST00000618056 PAM16Q9Y3D7 125 aa15.74■□□□□ 0.11
PMS1-220ENST00000618056 PKHD1L1Q86WI1 4243 aa15.73■□□□□ 0.11
PMS1-220ENST00000618056 LOC107984640A0A0U1RRK4 108 aa15.72■□□□□ 0.11
PMS1-220ENST00000618056 RNF151Q2KHN1 245 aa15.72■□□□□ 0.11
PMS1-220ENST00000618056 LINC01545Q5VT33 79 aa15.72■□□□□ 0.11
PMS1-220ENST00000618056 LINC01561Q8N1V8 128 aa15.72■□□□□ 0.11
PMS1-220ENST00000618056 ATOH7Q8N100 152 aa15.71■□□□□ 0.11
PMS1-220ENST00000618056 STPG4Q8N801 248 aa15.71■□□□□ 0.11
PMS1-220ENST00000618056 LINC00587B1AMM8 73 aa15.71■□□□□ 0.1
PMS1-220ENST00000618056 SPATA45Q537H7 98 aa15.71■□□□□ 0.1
PMS1-220ENST00000618056 SCGB3A1Q96QR1 104 aa15.71■□□□□ 0.1
PMS1-220ENST00000618056 MRPL35Q9NZE8 188 aaKnown RBP15.71■□□□□ 0.1
PMS1-220ENST00000618056 ATP5LO75964 103 aa15.7■□□□□ 0.1
PMS1-220ENST00000618056 DDTP30046 118 aa15.7■□□□□ 0.1
PMS1-220ENST00000618056 PTTG1IPP53801 180 aa15.7■□□□□ 0.1
PMS1-220ENST00000618056 NDUFA1O15239 70 aa15.69■□□□□ 0.1
PMS1-220ENST00000618056 SEC11AP67812 179 aa15.69■□□□□ 0.1
PMS1-220ENST00000618056 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.68■□□□□ 0.1
PMS1-220ENST00000618056 KIAA0087Q14695 138 aa15.68■□□□□ 0.1
PMS1-220ENST00000618056 HERC1Q15751 4861 aa15.66■□□□□ 0.1
PMS1-220ENST00000618056 HERVK_113P63121 156 aa15.66■□□□□ 0.1
PMS1-220ENST00000618056 HSBP1L1C9JCN9 74 aa15.65■□□□□ 0.1
PMS1-220ENST00000618056 GAGE2BQ13066 116 aa15.65■□□□□ 0.1
PMS1-220ENST00000618056 C10orf25Q5T742 122 aa15.65■□□□□ 0.1
PMS1-220ENST00000618056 C7orf33Q8WU49 177 aa15.65■□□□□ 0.1
PMS1-220ENST00000618056 A0A0J9YXV3 536 aa15.64■□□□□ 0.09
PMS1-220ENST00000618056 UNQ6190/PRO20217Q6UXQ8 127 aa15.64■□□□□ 0.09
PMS1-220ENST00000618056 PMCHL2Q9BQD1 86 aa15.64■□□□□ 0.09
PMS1-220ENST00000618056 GEMIN7Q9H840 131 aaKnown RBP15.62■□□□□ 0.09
PMS1-220ENST00000618056 C6orf48Q9UBA6 75 aa15.62■□□□□ 0.09
PMS1-220ENST00000618056 CDKN2A-AS1Q9UH64 79 aa15.62■□□□□ 0.09
PMS1-220ENST00000618056 LRP1Q07954 4544 aaKnown RBP15.61■□□□□ 0.09
PMS1-220ENST00000618056 TLX1NBP0CAT3 122 aa15.61■□□□□ 0.09
PMS1-220ENST00000618056 RPL18AQ02543 176 aaKnown RBP15.61■□□□□ 0.09
PMS1-220ENST00000618056 MIEN1Q9BRT3 115 aa15.6■□□□□ 0.09
PMS1-220ENST00000618056 CST9LQ9H4G1 147 aa15.6■□□□□ 0.09
PMS1-220ENST00000618056 KRTAP29-1A8MX34 341 aaPredicted RBP15.59■□□□□ 0.09
PMS1-220ENST00000618056 HNRNPA3P51991 378 aaKnown RBP15.59■□□□□ 0.09
PMS1-220ENST00000618056 TRBV30A0A0K0K1B3 111 aa15.59■□□□□ 0.09
PMS1-220ENST00000618056 TINCRA0A1B0GVN0 87 aa15.59■□□□□ 0.09
PMS1-220ENST00000618056 PMVKQ15126 192 aa15.59■□□□□ 0.09
PMS1-220ENST00000618056 FAT3Q8TDW7 4589 aa15.58■□□□□ 0.08
PMS1-220ENST00000618056 ODF1Q14990 250 aa15.58■□□□□ 0.08
PMS1-220ENST00000618056 C2orf82Q6UX34 121 aa15.58■□□□□ 0.08
PMS1-220ENST00000618056 Q8IZM0 81 aa15.58■□□□□ 0.08
PMS1-220ENST00000618056 UQCR10Q9UDW1 63 aa15.58■□□□□ 0.08
PMS1-220ENST00000618056 PRSS2P07478 247 aa15.57■□□□□ 0.08
PMS1-220ENST00000618056 IGLC3P0DOY3 106 aa15.57■□□□□ 0.08
PMS1-220ENST00000618056 IGLV5-45A0A087WSX0 123 aa15.56■□□□□ 0.08
PMS1-220ENST00000618056 TRAV12-1A0A0B4J245 112 aa15.55■□□□□ 0.08
PMS1-220ENST00000618056 Q6ZRP5 223 aa15.55■□□□□ 0.08
PMS1-220ENST00000618056 LINC00469Q8N7U9 141 aa15.55■□□□□ 0.08
PMS1-220ENST00000618056 TOMM7Q9P0U1 55 aa15.55■□□□□ 0.08
PMS1-220ENST00000618056 A0A1W2PNN7 141 aa15.54■□□□□ 0.08
PMS1-220ENST00000618056 C9orf116Q5BN46 136 aaPredicted RBP15.54■□□□□ 0.08
PMS1-220ENST00000618056 C6orf226Q5I0X4 101 aa15.53■□□□□ 0.08
PMS1-220ENST00000618056 DPM2O94777 84 aa15.52■□□□□ 0.08
PMS1-220ENST00000618056 OXTP01178 125 aa15.52■□□□□ 0.08
PMS1-220ENST00000618056 CKS1BP61024 79 aa15.52■□□□□ 0.08
PMS1-220ENST00000618056 PRR3P79522 188 aaKnown RBP15.52■□□□□ 0.08
PMS1-220ENST00000618056 SMIM1B2RUZ4 78 aa15.52■□□□□ 0.07
PMS1-220ENST00000618056 J3QL48 77 aa15.52■□□□□ 0.07
PMS1-220ENST00000618056 IGKCP01834 107 aa15.52■□□□□ 0.07
PMS1-220ENST00000618056 C14orf144Q96I85 54 aa15.52■□□□□ 0.07
PMS1-220ENST00000618056 NDUFC2-KCTD14E9PQ53 114 aa15.51■□□□□ 0.07
PMS1-220ENST00000618056 F8VRH5 84 aa15.49■□□□□ 0.07
PMS1-220ENST00000618056 PLNP26678 52 aa15.49■□□□□ 0.07
PMS1-220ENST00000618056 CHTOPQ9Y3Y2 248 aaKnown RBP15.49■□□□□ 0.07
PMS1-220ENST00000618056 CXCL5P42830 114 aa15.48■□□□□ 0.07
PMS1-220ENST00000618056 GAGE2EQ4V326 116 aa15.47■□□□□ 0.07
PMS1-220ENST00000618056 GAGE2DQ9UEU5 116 aa15.47■□□□□ 0.07
PMS1-220ENST00000618056 ANKRD39Q53RE8 183 aa15.46■□□□□ 0.07
PMS1-220ENST00000618056 SLC25A34Q6PIV7 304 aa15.46■□□□□ 0.07
PMS1-220ENST00000618056 H3BRM9 83 aa15.45■□□□□ 0.06
PMS1-220ENST00000618056 COX7B2Q8TF08 81 aa15.45■□□□□ 0.06
PMS1-220ENST00000618056 FAM168BA1KXE4 195 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms