RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
PCDHGC3-204ENST00000617222 HERVK_113P61574 105 aa10.08□□□□□ -0.8
PCDHGC3-204ENST00000617222 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
PCDHGC3-204ENST00000617222 STPG4Q8N801 248 aa10.07□□□□□ -0.8
PCDHGC3-204ENST00000617222 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
PCDHGC3-204ENST00000617222 LEPROTO15243 131 aa10.06□□□□□ -0.8
PCDHGC3-204ENST00000617222 CXCL5P42830 114 aa10.06□□□□□ -0.8
PCDHGC3-204ENST00000617222 SDIM1Q6ZPB5 146 aa10.06□□□□□ -0.8
PCDHGC3-204ENST00000617222 HECTD4Q9Y4D8 3996 aa10.05□□□□□ -0.8
PCDHGC3-204ENST00000617222 SCGB1D1O95968 90 aa10.05□□□□□ -0.8
PCDHGC3-204ENST00000617222 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
PCDHGC3-204ENST00000617222 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
PCDHGC3-204ENST00000617222 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
PCDHGC3-204ENST00000617222 AKR1D1P51857 326 aa10.04□□□□□ -0.8
PCDHGC3-204ENST00000617222 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-204ENST00000617222 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
PCDHGC3-204ENST00000617222 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
PCDHGC3-204ENST00000617222 E9PLD3 99 aa10.03□□□□□ -0.8
PCDHGC3-204ENST00000617222 J3QQQ9 107 aa10.02□□□□□ -0.81
PCDHGC3-204ENST00000617222 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
PCDHGC3-204ENST00000617222 ZNF625Q96I27 306 aaPredicted RBP10.02□□□□□ -0.81
PCDHGC3-204ENST00000617222 FAM30AQ9NZY2 134 aa10.02□□□□□ -0.81
PCDHGC3-204ENST00000617222 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
PCDHGC3-204ENST00000617222 LOC107984640A0A0U1RRK4 108 aa10.01□□□□□ -0.81
PCDHGC3-204ENST00000617222 LGALS3P17931 250 aaKnown RBP10.01□□□□□ -0.81
PCDHGC3-204ENST00000617222 GAGE2BQ13066 116 aa10.01□□□□□ -0.81
PCDHGC3-204ENST00000617222 NDUFA12Q9UI09 145 aa10.01□□□□□ -0.81
PCDHGC3-204ENST00000617222 PKHD1P08F94 4074 aa10□□□□□ -0.81
PCDHGC3-204ENST00000617222 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
PCDHGC3-204ENST00000617222 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
PCDHGC3-204ENST00000617222 A0A096LNI7 61 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 CHTF8P0CG12 524 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 MAJINQ3KP22 176 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 ANKRD39Q53RE8 183 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
PCDHGC3-204ENST00000617222 IGKV2D-26A0A0A0MRZ7 120 aa9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 MYMXA0A1B0GTQ4 84 aa9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 PANO1I0J062 215 aa9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 SFTA2Q6UW10 78 aa9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
PCDHGC3-204ENST00000617222 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
PCDHGC3-204ENST00000617222 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
PCDHGC3-204ENST00000617222 Q6ZRP5 223 aa9.97□□□□□ -0.81
PCDHGC3-204ENST00000617222 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
PCDHGC3-204ENST00000617222 HSBP1L1C9JCN9 74 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 PFN2P35080 140 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 NMUP48645 174 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 HERV-K104P63124 156 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 Q6ZSA8 131 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
PCDHGC3-204ENST00000617222 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
PCDHGC3-204ENST00000617222 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
PCDHGC3-204ENST00000617222 HAMPP81172 84 aa9.94□□□□□ -0.82
PCDHGC3-204ENST00000617222 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
PCDHGC3-204ENST00000617222 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
PCDHGC3-204ENST00000617222 DNAH8Q96JB1 4490 aa9.93□□□□□ -0.82
PCDHGC3-204ENST00000617222 LINC00158P58513 81 aa9.93□□□□□ -0.82
PCDHGC3-204ENST00000617222 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
PCDHGC3-204ENST00000617222 PYY3Q5JQD4 70 aa9.93□□□□□ -0.82
PCDHGC3-204ENST00000617222 SPACA4Q8TDM5 124 aa9.93□□□□□ -0.82
PCDHGC3-204ENST00000617222 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
PCDHGC3-204ENST00000617222 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
PCDHGC3-204ENST00000617222 XGP55808 180 aa9.92□□□□□ -0.82
PCDHGC3-204ENST00000617222 COX17Q14061 63 aa9.92□□□□□ -0.82
PCDHGC3-204ENST00000617222 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
PCDHGC3-204ENST00000617222 A0A087WYN8 130 aa9.91□□□□□ -0.82
PCDHGC3-204ENST00000617222 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
PCDHGC3-204ENST00000617222 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
PCDHGC3-204ENST00000617222 PCP2Q8IVA1 136 aa9.91□□□□□ -0.82
PCDHGC3-204ENST00000617222 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
PCDHGC3-204ENST00000617222 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
PCDHGC3-204ENST00000617222 CDK2AP2O75956 126 aa9.9□□□□□ -0.82
PCDHGC3-204ENST00000617222 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
PCDHGC3-204ENST00000617222 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
PCDHGC3-204ENST00000617222 VAMP8Q9BV40 100 aa9.88□□□□□ -0.83
PCDHGC3-204ENST00000617222 SND1-IT1Q9HBX3 110 aa9.88□□□□□ -0.83
PCDHGC3-204ENST00000617222 PAM16Q9Y3D7 125 aa9.88□□□□□ -0.83
PCDHGC3-204ENST00000617222 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
PCDHGC3-204ENST00000617222 SPATA45Q537H7 98 aa9.87□□□□□ -0.83
PCDHGC3-204ENST00000617222 MIR7-3HGQ8N6C7 128 aa9.87□□□□□ -0.83
PCDHGC3-204ENST00000617222 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
PCDHGC3-204ENST00000617222 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
PCDHGC3-204ENST00000617222 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
PCDHGC3-204ENST00000617222 DAND5Q8N907 189 aa9.86□□□□□ -0.83
PCDHGC3-204ENST00000617222 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
PCDHGC3-204ENST00000617222 LOC105371267A0A1B0GV96 52 aa9.85□□□□□ -0.83
PCDHGC3-204ENST00000617222 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
PCDHGC3-204ENST00000617222 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
PCDHGC3-204ENST00000617222 TIMM17BO60830 172 aa9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 COX8AP10176 69 aa9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 C14orf144Q96I85 54 aa9.83□□□□□ -0.84
PCDHGC3-204ENST00000617222 LITAFQ99732 161 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms