RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 ACTR3CQ9C0K3 210 aaPredicted RBP5.05□□□□□ -1.6
AP003900.1-202ENST00000616952 ST20Q9HBF5 79 aa5.05□□□□□ -1.6
AP003900.1-202ENST00000616952 V9GYH0 126 aa5.05□□□□□ -1.6
AP003900.1-202ENST00000616952 TRBV27A0A0K0K1C4 114 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 IFITM10A6NMD0 228 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 A6NN06 94 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 PRSS2P07478 247 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 BAGE2Q86Y30 109 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 TIMM21Q9BVV7 248 aa5.04□□□□□ -1.6
AP003900.1-202ENST00000616952 MBP02144 154 aa5.03□□□□□ -1.6
AP003900.1-202ENST00000616952 FCER1GP30273 86 aa5.03□□□□□ -1.6
AP003900.1-202ENST00000616952 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
AP003900.1-202ENST00000616952 LIMD2Q9BT23 127 aa5.03□□□□□ -1.6
AP003900.1-202ENST00000616952 CCDC160A6NGH7 325 aa5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 ATP6V0CP27449 155 aa5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 FAM104AQ969W3 186 aa5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 TOMM7Q9P0U1 55 aa5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 CHTOPQ9Y3Y2 248 aaKnown RBP5.02□□□□□ -1.61
AP003900.1-202ENST00000616952 F8VRH5 84 aa5.01□□□□□ -1.61
AP003900.1-202ENST00000616952 S100A9P06702 114 aaKnown RBP5.01□□□□□ -1.61
AP003900.1-202ENST00000616952 HBBP68871 147 aa5.01□□□□□ -1.61
AP003900.1-202ENST00000616952 ZNF726P1Q15940 193 aa5.01□□□□□ -1.61
AP003900.1-202ENST00000616952 CNFNQ9BYD5 112 aa5.01□□□□□ -1.61
AP003900.1-202ENST00000616952 CNPY1Q3B7I2 92 aa5□□□□□ -1.61
AP003900.1-202ENST00000616952 C6orf226Q5I0X4 101 aa5□□□□□ -1.61
AP003900.1-202ENST00000616952 CST9LP1Q5W188 147 aa5□□□□□ -1.61
AP003900.1-202ENST00000616952 GAGE2AQ6NT46 116 aa5□□□□□ -1.61
AP003900.1-202ENST00000616952 PSMG3Q9BT73 122 aaPredicted RBP5□□□□□ -1.61
AP003900.1-202ENST00000616952 XKRY2A2RUG3 117 aa4.99□□□□□ -1.61
AP003900.1-202ENST00000616952 SMIM15Q7Z3B0 74 aa4.99□□□□□ -1.61
AP003900.1-202ENST00000616952 FAM19A3Q7Z5A8 133 aa4.99□□□□□ -1.61
AP003900.1-202ENST00000616952 Q8IZM0 81 aa4.99□□□□□ -1.61
AP003900.1-202ENST00000616952 C9orf62Q8N4C0 152 aa4.99□□□□□ -1.61
AP003900.1-202ENST00000616952 TRBV20-1A0A075B6N2 111 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 SIX6O95475 246 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 MT3P25713 68 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 SERF2P84101 59 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 C6orf99Q4VX62 202 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 TMEM18Q96B42 140 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 TNFSF18Q9UNG2 199 aa4.98□□□□□ -1.61
AP003900.1-202ENST00000616952 CTXND1A0A1B0GTU2 59 aa4.97□□□□□ -1.61
AP003900.1-202ENST00000616952 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
AP003900.1-202ENST00000616952 TRIQKQ629K1 86 aa4.97□□□□□ -1.61
AP003900.1-202ENST00000616952 AKAP14Q86UN6 197 aa4.97□□□□□ -1.61
AP003900.1-202ENST00000616952 ALKBH7Q9BT30 221 aaPredicted RBP4.97□□□□□ -1.61
AP003900.1-202ENST00000616952 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 CENPXA8MT69 81 aa4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 MRPS36P82909 103 aaKnown RBP4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 ATP11AUNQ6ZP68 121 aa4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
AP003900.1-202ENST00000616952 VCYO14598 125 aa4.95□□□□□ -1.62
AP003900.1-202ENST00000616952 RPL39P62891 51 aaKnown RBP4.95□□□□□ -1.62
AP003900.1-202ENST00000616952 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
AP003900.1-202ENST00000616952 SPANXA1Q9NS26 97 aa4.95□□□□□ -1.62
AP003900.1-202ENST00000616952 NUDT15Q9NV35 164 aa4.95□□□□□ -1.62
AP003900.1-202ENST00000616952 FAM236DA0A1B0GTK5 79 aa4.94□□□□□ -1.62
AP003900.1-202ENST00000616952 FAM236CP0DP71 79 aa4.94□□□□□ -1.62
AP003900.1-202ENST00000616952 VPREB1P12018 145 aa4.94□□□□□ -1.62
AP003900.1-202ENST00000616952 Q6ZN92 141 aa4.94□□□□□ -1.62
AP003900.1-202ENST00000616952 PPP1R1CQ8WVI7 109 aa4.94□□□□□ -1.62
AP003900.1-202ENST00000616952 PET100P0DJ07 73 aa4.93□□□□□ -1.62
AP003900.1-202ENST00000616952 SPRR2DP22532 72 aa4.93□□□□□ -1.62
AP003900.1-202ENST00000616952 RPL35P42766 123 aaKnown RBP4.92□□□□□ -1.62
AP003900.1-202ENST00000616952 CXCL5P42830 114 aa4.92□□□□□ -1.62
AP003900.1-202ENST00000616952 MED9Q9NWA0 146 aa4.92□□□□□ -1.62
AP003900.1-202ENST00000616952 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 PAGE4O60829 102 aa4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 NOL3O60936 208 aaKnown RBP4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 MPC2O95563 127 aa4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
AP003900.1-202ENST00000616952 TAGLN2P37802 199 aaKnown RBP4.9□□□□□ -1.63
AP003900.1-202ENST00000616952 TMUB2Q71RG4 321 aa4.9□□□□□ -1.63
AP003900.1-202ENST00000616952 FXYD6-FXYD2A0A087WZ82 144 aa4.89□□□□□ -1.63
AP003900.1-202ENST00000616952 RAB5BP61020 215 aa4.89□□□□□ -1.63
AP003900.1-202ENST00000616952 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
AP003900.1-202ENST00000616952 PRSS47A8MTI9 375 aa4.88□□□□□ -1.63
AP003900.1-202ENST00000616952 PFDN1O60925 122 aa4.88□□□□□ -1.63
AP003900.1-202ENST00000616952 Q6ZVH6 145 aa4.88□□□□□ -1.63
AP003900.1-202ENST00000616952 H2BFSP57053 126 aa4.87□□□□□ -1.63
AP003900.1-202ENST00000616952 RPL24P83731 157 aaKnown RBP4.87□□□□□ -1.63
AP003900.1-202ENST00000616952 Q75L30 129 aa4.87□□□□□ -1.63
AP003900.1-202ENST00000616952 Q8NDZ9 215 aa4.87□□□□□ -1.63
AP003900.1-202ENST00000616952 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
AP003900.1-202ENST00000616952 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
AP003900.1-202ENST00000616952 TRBV20OR9-2A0A075B6H5 130 aa4.86□□□□□ -1.63
AP003900.1-202ENST00000616952 SMKR1H3BMG3 65 aa4.86□□□□□ -1.63
AP003900.1-202ENST00000616952 S100A5P33763 92 aa4.86□□□□□ -1.63
AP003900.1-202ENST00000616952 C1orf195Q5TG92 126 aa4.86□□□□□ -1.63
AP003900.1-202ENST00000616952 IGLV4-3A0A075B6K6 122 aa4.85□□□□□ -1.63
AP003900.1-202ENST00000616952 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
AP003900.1-202ENST00000616952 LYRM1O43325 122 aa4.84□□□□□ -1.63
AP003900.1-202ENST00000616952 RAB4AP20338 218 aa4.84□□□□□ -1.63
AP003900.1-202ENST00000616952 IFI27P40305 119 aaPredicted RBP4.84□□□□□ -1.63
AP003900.1-202ENST00000616952 RAB14P61106 215 aa4.84□□□□□ -1.63
AP003900.1-202ENST00000616952 TMEM191AQ9H0A3 160 aa4.84□□□□□ -1.63
AP003900.1-202ENST00000616952 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 1421.6 ms