RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 PRSS2P07478 247 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
UBXN1-218ENST00000616865 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
UBXN1-218ENST00000616865 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
UBXN1-218ENST00000616865 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
UBXN1-218ENST00000616865 AKR1D1P51857 326 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 Q6ZSA8 131 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
UBXN1-218ENST00000616865 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
UBXN1-218ENST00000616865 HERVK_113P61574 105 aa9.67□□□□□ -0.86
UBXN1-218ENST00000616865 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
UBXN1-218ENST00000616865 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
UBXN1-218ENST00000616865 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
UBXN1-218ENST00000616865 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
UBXN1-218ENST00000616865 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
UBXN1-218ENST00000616865 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.64□□□□□ -0.87
UBXN1-218ENST00000616865 SCGB1D1O95968 90 aa9.64□□□□□ -0.87
UBXN1-218ENST00000616865 CKS1BP61024 79 aa9.64□□□□□ -0.87
UBXN1-218ENST00000616865 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
UBXN1-218ENST00000616865 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
UBXN1-218ENST00000616865 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
UBXN1-218ENST00000616865 TMEM223A0PJW6 202 aa9.63□□□□□ -0.87
UBXN1-218ENST00000616865 Q8IZM0 81 aa9.63□□□□□ -0.87
UBXN1-218ENST00000616865 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
UBXN1-218ENST00000616865 F8WDY8 70 aa9.62□□□□□ -0.87
UBXN1-218ENST00000616865 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
UBXN1-218ENST00000616865 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
UBXN1-218ENST00000616865 NDUFA1O15239 70 aa9.61□□□□□ -0.87
UBXN1-218ENST00000616865 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
UBXN1-218ENST00000616865 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
UBXN1-218ENST00000616865 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
UBXN1-218ENST00000616865 CXCL5P42830 114 aa9.6□□□□□ -0.87
UBXN1-218ENST00000616865 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
UBXN1-218ENST00000616865 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
UBXN1-218ENST00000616865 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
UBXN1-218ENST00000616865 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
UBXN1-218ENST00000616865 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
UBXN1-218ENST00000616865 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
UBXN1-218ENST00000616865 LEPROTO15243 131 aa9.58□□□□□ -0.88
UBXN1-218ENST00000616865 LINC01620Q4KN68 170 aa9.58□□□□□ -0.88
UBXN1-218ENST00000616865 SERTAD4-AS1Q5TG53 156 aa9.58□□□□□ -0.88
UBXN1-218ENST00000616865 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
UBXN1-218ENST00000616865 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
UBXN1-218ENST00000616865 KRTAP10-4P60372 401 aaPredicted RBP9.57□□□□□ -0.88
UBXN1-218ENST00000616865 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
UBXN1-218ENST00000616865 Q6ZRU5 148 aa9.57□□□□□ -0.88
UBXN1-218ENST00000616865 STPG4Q8N801 248 aa9.57□□□□□ -0.88
UBXN1-218ENST00000616865 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
UBXN1-218ENST00000616865 E9PLD3 99 aa9.56□□□□□ -0.88
UBXN1-218ENST00000616865 SLPIP03973 132 aa9.56□□□□□ -0.88
UBXN1-218ENST00000616865 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
UBXN1-218ENST00000616865 J3QQQ9 107 aa9.55□□□□□ -0.88
UBXN1-218ENST00000616865 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
UBXN1-218ENST00000616865 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
UBXN1-218ENST00000616865 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
UBXN1-218ENST00000616865 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
UBXN1-218ENST00000616865 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
UBXN1-218ENST00000616865 RNF151Q2KHN1 245 aa9.54□□□□□ -0.88
UBXN1-218ENST00000616865 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
UBXN1-218ENST00000616865 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
UBXN1-218ENST00000616865 OXTP01178 125 aa9.53□□□□□ -0.88
UBXN1-218ENST00000616865 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
UBXN1-218ENST00000616865 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
UBXN1-218ENST00000616865 NMUP48645 174 aa9.52□□□□□ -0.89
UBXN1-218ENST00000616865 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
UBXN1-218ENST00000616865 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
UBXN1-218ENST00000616865 HERV-K104P63124 156 aa9.51□□□□□ -0.89
UBXN1-218ENST00000616865 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
UBXN1-218ENST00000616865 ANKRD39Q53RE8 183 aa9.51□□□□□ -0.89
UBXN1-218ENST00000616865 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
UBXN1-218ENST00000616865 MAJINQ3KP22 176 aa9.5□□□□□ -0.89
UBXN1-218ENST00000616865 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
UBXN1-218ENST00000616865 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
UBXN1-218ENST00000616865 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
UBXN1-218ENST00000616865 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
UBXN1-218ENST00000616865 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
UBXN1-218ENST00000616865 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 LINC00587B1AMM8 73 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 PFN2P35080 140 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 PYY3Q5JQD4 70 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
UBXN1-218ENST00000616865 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
UBXN1-218ENST00000616865 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
UBXN1-218ENST00000616865 LINC00158P58513 81 aa9.47□□□□□ -0.89
UBXN1-218ENST00000616865 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
UBXN1-218ENST00000616865 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
UBXN1-218ENST00000616865 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.9
UBXN1-218ENST00000616865 GAGE2EQ4V326 116 aa9.46□□□□□ -0.9
UBXN1-218ENST00000616865 GAGE2DQ9UEU5 116 aa9.46□□□□□ -0.9
UBXN1-218ENST00000616865 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
UBXN1-218ENST00000616865 TLX1NBP0CAT3 122 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms