RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
LINC00649-217ENST00000616030 Q9HAA7 133 aa6.88□□□□□ -1.31
LINC00649-217ENST00000616030 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
LINC00649-217ENST00000616030 A0A087WZ39 114 aa6.87□□□□□ -1.31
LINC00649-217ENST00000616030 XCL1P47992 114 aa6.87□□□□□ -1.31
LINC00649-217ENST00000616030 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
LINC00649-217ENST00000616030 RMI2Q96E14 147 aa6.87□□□□□ -1.31
LINC00649-217ENST00000616030 C14orf144Q96I85 54 aa6.87□□□□□ -1.31
LINC00649-217ENST00000616030 FAT1Q14517 4588 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 VPS13BQ7Z7G8 4022 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
LINC00649-217ENST00000616030 GCSHP23434 173 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 WFDC2Q14508 124 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 Q6ZSA8 131 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 BOD1L2Q8IYS8 172 aa6.86□□□□□ -1.31
LINC00649-217ENST00000616030 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 J3QQQ9 107 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 COX7A2LO14548 114 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 C5orf38Q86SI9 138 aa6.85□□□□□ -1.31
LINC00649-217ENST00000616030 IGLV5-52A0A0A0MRZ9 124 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 APOMO95445 188 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINC00649-217ENST00000616030 FOXI1Q12951 378 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 C1orf43Q9BWL3 253 aa6.84□□□□□ -1.31
LINC00649-217ENST00000616030 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
LINC00649-217ENST00000616030 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
LINC00649-217ENST00000616030 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
LINC00649-217ENST00000616030 MALP21145 153 aa6.83□□□□□ -1.32
LINC00649-217ENST00000616030 DDTP30046 118 aa6.83□□□□□ -1.32
LINC00649-217ENST00000616030 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
LINC00649-217ENST00000616030 GHRHP01286 108 aa6.82□□□□□ -1.32
LINC00649-217ENST00000616030 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
LINC00649-217ENST00000616030 SFTA2Q6UW10 78 aa6.82□□□□□ -1.32
LINC00649-217ENST00000616030 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
LINC00649-217ENST00000616030 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 PRSS2P07478 247 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 TSPEAR-AS2P59090 65 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 TTTY13Q9BZ97 58 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
LINC00649-217ENST00000616030 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 NDUFA1O15239 70 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 CXCL5P42830 114 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 HERV-K104P63124 156 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 C6orf226Q5I0X4 101 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 Q8IZM0 81 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
LINC00649-217ENST00000616030 EPM2AB3EWF7 344 aa6.79□□□□□ -1.32
LINC00649-217ENST00000616030 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
LINC00649-217ENST00000616030 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
LINC00649-217ENST00000616030 LINC00587B1AMM8 73 aa6.78□□□□□ -1.32
LINC00649-217ENST00000616030 LECT2O14960 151 aa6.78□□□□□ -1.32
LINC00649-217ENST00000616030 CIRBPQ14011 172 aaKnown RBP6.78□□□□□ -1.32
LINC00649-217ENST00000616030 C2orf91Q6ZV80 131 aa6.78□□□□□ -1.32
LINC00649-217ENST00000616030 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
LINC00649-217ENST00000616030 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 F8WDY8 70 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 TIMM17BO60830 172 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 CKS1BP61024 79 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 CTAG1AP78358 180 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 TAL2Q16559 108 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 Q5VSD8 79 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.33
LINC00649-217ENST00000616030 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
LINC00649-217ENST00000616030 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
LINC00649-217ENST00000616030 HSD52Q0P140 79 aa6.76□□□□□ -1.33
LINC00649-217ENST00000616030 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
LINC00649-217ENST00000616030 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
LINC00649-217ENST00000616030 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
LINC00649-217ENST00000616030 TMEM238C9JI98 176 aa6.75□□□□□ -1.33
LINC00649-217ENST00000616030 USP17L23D6RBM5 183 aa6.75□□□□□ -1.33
LINC00649-217ENST00000616030 ZNF561-AS1K7EIQ3 104 aa6.75□□□□□ -1.33
LINC00649-217ENST00000616030 Q6ZVH6 145 aa6.75□□□□□ -1.33
LINC00649-217ENST00000616030 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
LINC00649-217ENST00000616030 GVQW2A0A096LPI5 108 aaPredicted RBP6.74□□□□□ -1.33
LINC00649-217ENST00000616030 M0R143 59 aa6.74□□□□□ -1.33
LINC00649-217ENST00000616030 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
LINC00649-217ENST00000616030 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC00649-217ENST00000616030 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
LINC00649-217ENST00000616030 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
LINC00649-217ENST00000616030 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
LINC00649-217ENST00000616030 C15orf56Q8N910 161 aa6.73□□□□□ -1.33
LINC00649-217ENST00000616030 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
LINC00649-217ENST00000616030 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
LINC00649-217ENST00000616030 IFITM1P13164 125 aa6.72□□□□□ -1.33
LINC00649-217ENST00000616030 COX17Q14061 63 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms