RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
SRGAP2C-204ENST00000613462 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
SRGAP2C-204ENST00000613462 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
SRGAP2C-204ENST00000613462 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
SRGAP2C-204ENST00000613462 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
SRGAP2C-204ENST00000613462 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRGAP2C-204ENST00000613462 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
SRGAP2C-204ENST00000613462 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
SRGAP2C-204ENST00000613462 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 SLPIP03973 132 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 PRSS2P07478 247 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 SPATA45Q537H7 98 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 STPG4Q8N801 248 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 CAMK2N2Q96S95 79 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
SRGAP2C-204ENST00000613462 SMIM1B2RUZ4 78 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 NDUFA1O15239 70 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 Q8IZM0 81 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 PLEKHB2Q96CS7 222 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 C12orf57Q99622 126 aa8.4□□□□□ -1.06
SRGAP2C-204ENST00000613462 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
SRGAP2C-204ENST00000613462 NMUP48645 174 aa8.39□□□□□ -1.07
SRGAP2C-204ENST00000613462 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SRGAP2C-204ENST00000613462 MAJINQ3KP22 176 aa8.39□□□□□ -1.07
SRGAP2C-204ENST00000613462 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
SRGAP2C-204ENST00000613462 E9PLD3 99 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 LEPROTO15243 131 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 CXCL5P42830 114 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 CKS1BP61024 79 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 ANKRD39Q53RE8 183 aa8.38□□□□□ -1.07
SRGAP2C-204ENST00000613462 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
SRGAP2C-204ENST00000613462 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
SRGAP2C-204ENST00000613462 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
SRGAP2C-204ENST00000613462 Q6ZRU5 148 aa8.37□□□□□ -1.07
SRGAP2C-204ENST00000613462 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
SRGAP2C-204ENST00000613462 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
SRGAP2C-204ENST00000613462 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
SRGAP2C-204ENST00000613462 J3QQQ9 107 aa8.36□□□□□ -1.07
SRGAP2C-204ENST00000613462 Q6ZSA8 131 aa8.36□□□□□ -1.07
SRGAP2C-204ENST00000613462 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
SRGAP2C-204ENST00000613462 SDIM1Q6ZPB5 146 aa8.35□□□□□ -1.07
SRGAP2C-204ENST00000613462 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
SRGAP2C-204ENST00000613462 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
SRGAP2C-204ENST00000613462 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
SRGAP2C-204ENST00000613462 IGKV2D-26A0A0A0MRZ7 120 aa8.33□□□□□ -1.08
SRGAP2C-204ENST00000613462 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
SRGAP2C-204ENST00000613462 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
SRGAP2C-204ENST00000613462 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
SRGAP2C-204ENST00000613462 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
SRGAP2C-204ENST00000613462 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 SLC25A34Q6PIV7 304 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 C6orf48Q9UBA6 75 aa8.32□□□□□ -1.08
SRGAP2C-204ENST00000613462 TSTD3H0UI37 97 aa8.31□□□□□ -1.08
SRGAP2C-204ENST00000613462 COX8AP10176 69 aa8.31□□□□□ -1.08
SRGAP2C-204ENST00000613462 CIRBPQ14011 172 aaKnown RBP8.31□□□□□ -1.08
SRGAP2C-204ENST00000613462 C14orf144Q96I85 54 aa8.31□□□□□ -1.08
SRGAP2C-204ENST00000613462 PRO1933Q9H354 126 aa8.31□□□□□ -1.08
SRGAP2C-204ENST00000613462 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 HERV-K104P63124 156 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 PCP2Q8IVA1 136 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
SRGAP2C-204ENST00000613462 A0A096LNI7 61 aa8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 UQCR10Q9UDW1 63 aa8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
SRGAP2C-204ENST00000613462 IGKV2-24A0A0C4DH68 120 aa8.28□□□□□ -1.08
SRGAP2C-204ENST00000613462 XGP55808 180 aa8.28□□□□□ -1.08
SRGAP2C-204ENST00000613462 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
SRGAP2C-204ENST00000613462 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
SRGAP2C-204ENST00000613462 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
SRGAP2C-204ENST00000613462 CHTF8P0CG12 524 aa8.27□□□□□ -1.09
SRGAP2C-204ENST00000613462 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
SRGAP2C-204ENST00000613462 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
SRGAP2C-204ENST00000613462 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
SRGAP2C-204ENST00000613462 DLEU1O43261 78 aa8.26□□□□□ -1.09
SRGAP2C-204ENST00000613462 COX17Q14061 63 aa8.26□□□□□ -1.09
SRGAP2C-204ENST00000613462 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
SRGAP2C-204ENST00000613462 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
SRGAP2C-204ENST00000613462 PANO1I0J062 215 aa8.25□□□□□ -1.09
SRGAP2C-204ENST00000613462 HNRNPA3P51991 378 aaKnown RBP8.25□□□□□ -1.09
SRGAP2C-204ENST00000613462 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
SRGAP2C-204ENST00000613462 Q6ZRP5 223 aa8.25□□□□□ -1.09
SRGAP2C-204ENST00000613462 A0A087WYN8 130 aa8.24□□□□□ -1.09
SRGAP2C-204ENST00000613462 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
SRGAP2C-204ENST00000613462 TMEM238C9JI98 176 aa8.24□□□□□ -1.09
SRGAP2C-204ENST00000613462 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
SRGAP2C-204ENST00000613462 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms