RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
GRIA3-205ENST00000611689 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
GRIA3-205ENST00000611689 NDUFA1O15239 70 aa10.02□□□□□ -0.81
GRIA3-205ENST00000611689 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
GRIA3-205ENST00000611689 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
GRIA3-205ENST00000611689 C20orf202A1L168 122 aa10.01□□□□□ -0.81
GRIA3-205ENST00000611689 CKS1BP61024 79 aa10.01□□□□□ -0.81
GRIA3-205ENST00000611689 RNF151Q2KHN1 245 aa10□□□□□ -0.81
GRIA3-205ENST00000611689 SDIM1Q6ZPB5 146 aa10□□□□□ -0.81
GRIA3-205ENST00000611689 CXCL5P42830 114 aa9.99□□□□□ -0.81
GRIA3-205ENST00000611689 C6orf48Q9UBA6 75 aa9.99□□□□□ -0.81
GRIA3-205ENST00000611689 TRBV30A0A0K0K1B3 111 aa9.98□□□□□ -0.81
GRIA3-205ENST00000611689 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
GRIA3-205ENST00000611689 HERVK_113P61574 105 aa9.97□□□□□ -0.81
GRIA3-205ENST00000611689 LEPROTO15243 131 aa9.96□□□□□ -0.82
GRIA3-205ENST00000611689 AKR1D1P51857 326 aa9.96□□□□□ -0.82
GRIA3-205ENST00000611689 STPG4Q8N801 248 aa9.96□□□□□ -0.82
GRIA3-205ENST00000611689 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.82
GRIA3-205ENST00000611689 LOC107984640A0A0U1RRK4 108 aa9.95□□□□□ -0.82
GRIA3-205ENST00000611689 C9orf116Q5BN46 136 aaPredicted RBP9.95□□□□□ -0.82
GRIA3-205ENST00000611689 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
GRIA3-205ENST00000611689 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
GRIA3-205ENST00000611689 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
GRIA3-205ENST00000611689 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
GRIA3-205ENST00000611689 E9PLD3 99 aa9.94□□□□□ -0.82
GRIA3-205ENST00000611689 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
GRIA3-205ENST00000611689 Q6ZSA8 131 aa9.94□□□□□ -0.82
GRIA3-205ENST00000611689 J3QQQ9 107 aa9.93□□□□□ -0.82
GRIA3-205ENST00000611689 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
GRIA3-205ENST00000611689 A0A096LNI7 61 aa9.92□□□□□ -0.82
GRIA3-205ENST00000611689 PANO1I0J062 215 aa9.92□□□□□ -0.82
GRIA3-205ENST00000611689 SCGB1D1O95968 90 aa9.92□□□□□ -0.82
GRIA3-205ENST00000611689 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
GRIA3-205ENST00000611689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
GRIA3-205ENST00000611689 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
GRIA3-205ENST00000611689 LGALS3P17931 250 aaKnown RBP9.91□□□□□ -0.82
GRIA3-205ENST00000611689 RPL18AQ02543 176 aaKnown RBP9.91□□□□□ -0.82
GRIA3-205ENST00000611689 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
GRIA3-205ENST00000611689 NDUFA12Q9UI09 145 aa9.91□□□□□ -0.82
GRIA3-205ENST00000611689 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
GRIA3-205ENST00000611689 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
GRIA3-205ENST00000611689 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
GRIA3-205ENST00000611689 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
GRIA3-205ENST00000611689 Q6ZRP5 223 aa9.9□□□□□ -0.82
GRIA3-205ENST00000611689 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.83
GRIA3-205ENST00000611689 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.83
GRIA3-205ENST00000611689 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 MYMXA0A1B0GTQ4 84 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 NMUP48645 174 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 XGP55808 180 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
GRIA3-205ENST00000611689 CDK2AP2O75956 126 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 HERV-K104P63124 156 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 GAGE2DQ9UEU5 116 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
GRIA3-205ENST00000611689 PFN2P35080 140 aa9.87□□□□□ -0.83
GRIA3-205ENST00000611689 HAMPP81172 84 aa9.87□□□□□ -0.83
GRIA3-205ENST00000611689 JOSD1Q15040 202 aaPredicted RBP9.87□□□□□ -0.83
GRIA3-205ENST00000611689 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
GRIA3-205ENST00000611689 COX17Q14061 63 aa9.86□□□□□ -0.83
GRIA3-205ENST00000611689 SCXQ7RTU7 201 aa9.86□□□□□ -0.83
GRIA3-205ENST00000611689 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
GRIA3-205ENST00000611689 A0A087WYN8 130 aa9.84□□□□□ -0.83
GRIA3-205ENST00000611689 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
GRIA3-205ENST00000611689 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
GRIA3-205ENST00000611689 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
GRIA3-205ENST00000611689 TTTY13Q9BZ97 58 aa9.84□□□□□ -0.83
GRIA3-205ENST00000611689 LINC00587B1AMM8 73 aa9.83□□□□□ -0.84
GRIA3-205ENST00000611689 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
GRIA3-205ENST00000611689 LINC00158P58513 81 aa9.83□□□□□ -0.84
GRIA3-205ENST00000611689 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
GRIA3-205ENST00000611689 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
GRIA3-205ENST00000611689 A0A0J9YXY3 114 aa9.82□□□□□ -0.84
GRIA3-205ENST00000611689 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
GRIA3-205ENST00000611689 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
GRIA3-205ENST00000611689 ZNF815PA8K554 130 aa9.82□□□□□ -0.84
GRIA3-205ENST00000611689 PYY3Q5JQD4 70 aa9.82□□□□□ -0.84
GRIA3-205ENST00000611689 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
GRIA3-205ENST00000611689 KIAA1109Q2LD37 5005 aa9.81□□□□□ -0.84
GRIA3-205ENST00000611689 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
GRIA3-205ENST00000611689 EPM2AB3EWF7 344 aa9.8□□□□□ -0.84
GRIA3-205ENST00000611689 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
GRIA3-205ENST00000611689 HSPG2P98160 4391 aa9.79□□□□□ -0.84
GRIA3-205ENST00000611689 RYR1P21817 5038 aa9.79□□□□□ -0.84
GRIA3-205ENST00000611689 KRTAP7-1Q8IUC3 87 aa9.79□□□□□ -0.84
GRIA3-205ENST00000611689 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
GRIA3-205ENST00000611689 SMR3BP02814 79 aaPredicted RBP9.77□□□□□ -0.85
GRIA3-205ENST00000611689 VAMP8Q9BV40 100 aa9.77□□□□□ -0.85
GRIA3-205ENST00000611689 TIMM17BO60830 172 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
GRIA3-205ENST00000611689 DAND5Q8N907 189 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 LITAFQ99732 161 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 PLA2G2DQ9UNK4 145 aa9.76□□□□□ -0.85
GRIA3-205ENST00000611689 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms