RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
MUC1-224ENST00000611577 Q6ZRU5 148 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 F8WDY8 70 aa11.29□□□□□ -0.6
MUC1-224ENST00000611577 H0Y8G0 127 aa11.29□□□□□ -0.6
MUC1-224ENST00000611577 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
MUC1-224ENST00000611577 LINC00310P59036 64 aa11.28□□□□□ -0.6
MUC1-224ENST00000611577 CKS1BP61024 79 aa11.28□□□□□ -0.6
MUC1-224ENST00000611577 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
MUC1-224ENST00000611577 C6orf226Q5I0X4 101 aa11.28□□□□□ -0.6
MUC1-224ENST00000611577 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
MUC1-224ENST00000611577 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.61
MUC1-224ENST00000611577 IGLC3P0DOY3 106 aa11.27□□□□□ -0.61
MUC1-224ENST00000611577 FABP4P15090 132 aa11.27□□□□□ -0.61
MUC1-224ENST00000611577 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
MUC1-224ENST00000611577 LOC107984640A0A0U1RRK4 108 aa11.26□□□□□ -0.61
MUC1-224ENST00000611577 NUPR1O60356 82 aa11.26□□□□□ -0.61
MUC1-224ENST00000611577 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
MUC1-224ENST00000611577 Q8IZM0 81 aa11.26□□□□□ -0.61
MUC1-224ENST00000611577 MRPL35Q9NZE8 188 aaKnown RBP11.26□□□□□ -0.61
MUC1-224ENST00000611577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.26□□□□□ -0.61
MUC1-224ENST00000611577 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
MUC1-224ENST00000611577 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
MUC1-224ENST00000611577 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
MUC1-224ENST00000611577 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
MUC1-224ENST00000611577 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
MUC1-224ENST00000611577 RPL18AQ02543 176 aaKnown RBP11.24□□□□□ -0.61
MUC1-224ENST00000611577 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 KIAA0087Q14695 138 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 LINC00474Q9P2X8 69 aa11.24□□□□□ -0.61
MUC1-224ENST00000611577 A0A096LNI7 61 aa11.23□□□□□ -0.61
MUC1-224ENST00000611577 C11orf86A6NJI1 115 aa11.23□□□□□ -0.61
MUC1-224ENST00000611577 ZNF22P17026 224 aaPredicted RBP11.23□□□□□ -0.61
MUC1-224ENST00000611577 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
MUC1-224ENST00000611577 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
MUC1-224ENST00000611577 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
MUC1-224ENST00000611577 F8VRH5 84 aa11.22□□□□□ -0.61
MUC1-224ENST00000611577 CXCL5P42830 114 aa11.22□□□□□ -0.61
MUC1-224ENST00000611577 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
MUC1-224ENST00000611577 PANO1I0J062 215 aa11.21□□□□□ -0.61
MUC1-224ENST00000611577 SPACA4Q8TDM5 124 aa11.21□□□□□ -0.61
MUC1-224ENST00000611577 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
MUC1-224ENST00000611577 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
MUC1-224ENST00000611577 A0A087WYN8 130 aa11.19□□□□□ -0.62
MUC1-224ENST00000611577 PTTG1IPP53801 180 aa11.19□□□□□ -0.62
MUC1-224ENST00000611577 CIRBPQ14011 172 aaKnown RBP11.19□□□□□ -0.62
MUC1-224ENST00000611577 STPG4Q8N801 248 aa11.18□□□□□ -0.62
MUC1-224ENST00000611577 LRP2P98164 4655 aa11.18□□□□□ -0.62
MUC1-224ENST00000611577 RNF213Q63HN8 5207 aa11.18□□□□□ -0.62
MUC1-224ENST00000611577 ODF1Q14990 250 aa11.17□□□□□ -0.62
MUC1-224ENST00000611577 MT1HL1P0DM35 61 aa11.16□□□□□ -0.62
MUC1-224ENST00000611577 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
MUC1-224ENST00000611577 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
MUC1-224ENST00000611577 TNXBP22105 4242 aa11.16□□□□□ -0.62
MUC1-224ENST00000611577 PLNP26678 52 aa11.15□□□□□ -0.62
MUC1-224ENST00000611577 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
MUC1-224ENST00000611577 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
MUC1-224ENST00000611577 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 NDUFC2-KCTD14E9PQ53 114 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 TLX1NBP0CAT3 122 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 Q6ZRP5 223 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 PMCHL2Q9BQD1 86 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 PLAC8Q9NZF1 115 aa11.14□□□□□ -0.63
MUC1-224ENST00000611577 TMEM223A0PJW6 202 aa11.13□□□□□ -0.63
MUC1-224ENST00000611577 DPM2O94777 84 aa11.13□□□□□ -0.63
MUC1-224ENST00000611577 S100A6P06703 90 aa11.12□□□□□ -0.63
MUC1-224ENST00000611577 SYS1-DBNDD2H3BUS1 97 aa11.11□□□□□ -0.63
MUC1-224ENST00000611577 IGKCP01834 107 aa11.11□□□□□ -0.63
MUC1-224ENST00000611577 HERVK_113P61574 105 aa11.11□□□□□ -0.63
MUC1-224ENST00000611577 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
MUC1-224ENST00000611577 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
MUC1-224ENST00000611577 KRTDAPP60985 99 aa11.1□□□□□ -0.63
MUC1-224ENST00000611577 S100A2P29034 98 aa11.09□□□□□ -0.63
MUC1-224ENST00000611577 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
MUC1-224ENST00000611577 PFN2P35080 140 aa11.07□□□□□ -0.64
MUC1-224ENST00000611577 ZNF625Q96I27 306 aaPredicted RBP11.07□□□□□ -0.64
MUC1-224ENST00000611577 A0A1W2PNN7 141 aa11.06□□□□□ -0.64
MUC1-224ENST00000611577 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
MUC1-224ENST00000611577 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
MUC1-224ENST00000611577 C20orf202A1L168 122 aa11.05□□□□□ -0.64
MUC1-224ENST00000611577 PLEKHB2Q96CS7 222 aa11.05□□□□□ -0.64
MUC1-224ENST00000611577 XAGE1AQ9HD64 81 aa11.05□□□□□ -0.64
MUC1-224ENST00000611577 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
MUC1-224ENST00000611577 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
MUC1-224ENST00000611577 LEPROTO15243 131 aa11.04□□□□□ -0.64
MUC1-224ENST00000611577 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
MUC1-224ENST00000611577 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
MUC1-224ENST00000611577 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
MUC1-224ENST00000611577 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
MUC1-224ENST00000611577 COX17Q14061 63 aa11.02□□□□□ -0.65
MUC1-224ENST00000611577 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
MUC1-224ENST00000611577 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
MUC1-224ENST00000611577 LINC00158P58513 81 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms