RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
SNCA-212ENST00000611107 SYCNQ0VAF6 134 aa5.51□□□□□ -1.53
SNCA-212ENST00000611107 Q6ZRU5 148 aa5.51□□□□□ -1.53
SNCA-212ENST00000611107 C2orf48Q96LS8 159 aa5.51□□□□□ -1.53
SNCA-212ENST00000611107 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 SPINK8P0C7L1 97 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 FABP4P15090 132 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 ODF1Q14990 250 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 C10orf25Q5T742 122 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 CAMK2N2Q96S95 79 aa5.5□□□□□ -1.53
SNCA-212ENST00000611107 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
SNCA-212ENST00000611107 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
SNCA-212ENST00000611107 A0A096LNI7 61 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 IGLV5-39A0A0G2JS06 123 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 F8VRH5 84 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 H0Y8G0 127 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 NDUFA1O15239 70 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 CIRBPQ14011 172 aaKnown RBP5.49□□□□□ -1.53
SNCA-212ENST00000611107 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 Q8IZM0 81 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 PACRGQ96M98 296 aaPredicted RBP5.49□□□□□ -1.53
SNCA-212ENST00000611107 HSPB8Q9UJY1 196 aa5.49□□□□□ -1.53
SNCA-212ENST00000611107 UNQ6190/PRO20217Q6UXQ8 127 aa5.48□□□□□ -1.53
SNCA-212ENST00000611107 SPACA4Q8TDM5 124 aa5.48□□□□□ -1.53
SNCA-212ENST00000611107 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
SNCA-212ENST00000611107 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
SNCA-212ENST00000611107 F8WDY8 70 aa5.47□□□□□ -1.53
SNCA-212ENST00000611107 H3BRM9 83 aa5.47□□□□□ -1.53
SNCA-212ENST00000611107 TMEM170BQ5T4T1 132 aa5.47□□□□□ -1.53
SNCA-212ENST00000611107 A0A087WYN8 130 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 PRSS2P07478 247 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 RNF151Q2KHN1 245 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 COX7B2Q8TF08 81 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
SNCA-212ENST00000611107 TNXBP22105 4242 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 LOC107984640A0A0U1RRK4 108 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 CXCL5P42830 114 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 PTTG1IPP53801 180 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
SNCA-212ENST00000611107 C9orf116Q5BN46 136 aaPredicted RBP5.45□□□□□ -1.54
SNCA-212ENST00000611107 HIST3H2BBQ8N257 126 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 MAP1LC3CQ9BXW4 147 aa5.45□□□□□ -1.54
SNCA-212ENST00000611107 PLA2G1BP04054 148 aaKnown RBP5.44□□□□□ -1.54
SNCA-212ENST00000611107 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 C3orf79P0CE67 100 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 PLNP26678 52 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 CKS1BP61024 79 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
SNCA-212ENST00000611107 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 LINC01545Q5VT33 79 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
SNCA-212ENST00000611107 DPM2O94777 84 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 IGKCP01834 107 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 TSPEAR-AS2P59090 65 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 GAGE2BQ13066 116 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 MAJINQ3KP22 176 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 Q6ZRP5 223 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
SNCA-212ENST00000611107 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
SNCA-212ENST00000611107 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
SNCA-212ENST00000611107 KRTDAPP60985 99 aa5.42□□□□□ -1.54
SNCA-212ENST00000611107 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
SNCA-212ENST00000611107 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
SNCA-212ENST00000611107 HIST1H2BLQ99880 126 aa5.42□□□□□ -1.54
SNCA-212ENST00000611107 S100A6P06703 90 aa5.41□□□□□ -1.54
SNCA-212ENST00000611107 STPG4Q8N801 248 aa5.41□□□□□ -1.54
SNCA-212ENST00000611107 LINC00474Q9P2X8 69 aa5.41□□□□□ -1.54
SNCA-212ENST00000611107 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 FAM168BA1KXE4 195 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
SNCA-212ENST00000611107 GAGE2EQ4V326 116 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 C9orf129Q5T035 196 aaKnown RBP5.4□□□□□ -1.54
SNCA-212ENST00000611107 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.54
SNCA-212ENST00000611107 LEPROTO15243 131 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 S100A2P29034 98 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 KRTAP7-1Q8IUC3 87 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 DPH3Q96FX2 82 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 ERG28Q9UKR5 140 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
SNCA-212ENST00000611107 E9PLD3 99 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 J3QL48 77 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 HERVK_113P61574 105 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 FAM19A5Q7Z5A7 132 aaPredicted RBP5.38□□□□□ -1.55
SNCA-212ENST00000611107 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 XAGE1AQ9HD64 81 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
SNCA-212ENST00000611107 C20orf202A1L168 122 aa5.37□□□□□ -1.55
SNCA-212ENST00000611107 J3QQQ9 107 aa5.37□□□□□ -1.55
SNCA-212ENST00000611107 PFN2P35080 140 aa5.37□□□□□ -1.55
SNCA-212ENST00000611107 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
SNCA-212ENST00000611107 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
SNCA-212ENST00000611107 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms