RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 C14orf132Q9NPU4 83 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
RTN1-209ENST00000611068 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
RTN1-209ENST00000611068 DNAL4O96015 105 aa11.38□□□□□ -0.59
RTN1-209ENST00000611068 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
RTN1-209ENST00000611068 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
RTN1-209ENST00000611068 C20orf197Q8N268 126 aa11.38□□□□□ -0.59
RTN1-209ENST00000611068 NDUFC2O95298 119 aa11.37□□□□□ -0.59
RTN1-209ENST00000611068 PRIMA1Q86XR5 153 aa11.37□□□□□ -0.59
RTN1-209ENST00000611068 UBE2D4Q9Y2X8 147 aa11.37□□□□□ -0.59
RTN1-209ENST00000611068 C20orf203Q8NBC4 194 aa11.36□□□□□ -0.59
RTN1-209ENST00000611068 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
RTN1-209ENST00000611068 VSIG2Q96IQ7 327 aa11.36□□□□□ -0.59
RTN1-209ENST00000611068 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
RTN1-209ENST00000611068 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
RTN1-209ENST00000611068 GHRHP01286 108 aa11.35□□□□□ -0.59
RTN1-209ENST00000611068 PKD1L1Q8TDX9 2849 aa11.35□□□□□ -0.59
RTN1-209ENST00000611068 NDUFC2-KCTD14E9PQ53 114 aa11.35□□□□□ -0.59
RTN1-209ENST00000611068 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
RTN1-209ENST00000611068 RPL28P46779 137 aaKnown RBP11.34□□□□□ -0.59
RTN1-209ENST00000611068 C1orf195Q5TG92 126 aa11.34□□□□□ -0.59
RTN1-209ENST00000611068 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
RTN1-209ENST00000611068 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
RTN1-209ENST00000611068 LINC00308Q8TCZ7 52 aa11.33□□□□□ -0.6
RTN1-209ENST00000611068 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
RTN1-209ENST00000611068 BRK1Q8WUW1 75 aa11.33□□□□□ -0.6
RTN1-209ENST00000611068 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
RTN1-209ENST00000611068 KRTAP24-1Q3LI83 254 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 C19orf73Q9NVV2 129 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 TRBV6-5A0A0K0K1A5 114 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 INSP01308 110 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 XCL1P47992 114 aa11.32□□□□□ -0.6
RTN1-209ENST00000611068 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
RTN1-209ENST00000611068 LINC00474Q9P2X8 69 aa11.31□□□□□ -0.6
RTN1-209ENST00000611068 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
RTN1-209ENST00000611068 A8MTW9 85 aa11.3□□□□□ -0.6
RTN1-209ENST00000611068 H7BZZ5 65 aa11.3□□□□□ -0.6
RTN1-209ENST00000611068 M0QY20 66 aa11.3□□□□□ -0.6
RTN1-209ENST00000611068 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
RTN1-209ENST00000611068 Q9UF83 564 aa11.29□□□□□ -0.6
RTN1-209ENST00000611068 TIMM17BO60830 172 aa11.28□□□□□ -0.6
RTN1-209ENST00000611068 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.6
RTN1-209ENST00000611068 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
RTN1-209ENST00000611068 SMIM26A0A096LP01 95 aa11.25□□□□□ -0.61
RTN1-209ENST00000611068 NCR3O14931 201 aa11.25□□□□□ -0.61
RTN1-209ENST00000611068 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
RTN1-209ENST00000611068 A0A087WYN8 130 aa11.25□□□□□ -0.61
RTN1-209ENST00000611068 Q6ZSN1 163 aa11.25□□□□□ -0.61
RTN1-209ENST00000611068 TRGV1A0A0A0MS02 117 aa11.24□□□□□ -0.61
RTN1-209ENST00000611068 NDUFA1O15239 70 aa11.24□□□□□ -0.61
RTN1-209ENST00000611068 Q9H8V8 135 aa11.24□□□□□ -0.61
RTN1-209ENST00000611068 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
RTN1-209ENST00000611068 SS18Q15532 418 aa11.23□□□□□ -0.61
RTN1-209ENST00000611068 OXLD1Q5BKU9 147 aa11.23□□□□□ -0.61
RTN1-209ENST00000611068 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
RTN1-209ENST00000611068 IL17DQ8TAD2 202 aa11.23□□□□□ -0.61
RTN1-209ENST00000611068 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
RTN1-209ENST00000611068 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
RTN1-209ENST00000611068 Q6ZTI0 123 aa11.22□□□□□ -0.61
RTN1-209ENST00000611068 OBSCN-AS1Q96MR7 158 aa11.22□□□□□ -0.61
RTN1-209ENST00000611068 PIK3CD-AS1Q5SR53 167 aa11.21□□□□□ -0.61
RTN1-209ENST00000611068 SNURFQ9Y675 71 aa11.21□□□□□ -0.61
RTN1-209ENST00000611068 DEFB4AO15263 64 aa11.19□□□□□ -0.62
RTN1-209ENST00000611068 CMC4P56277 68 aaPredicted RBP11.19□□□□□ -0.62
RTN1-209ENST00000611068 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
RTN1-209ENST00000611068 RMI2Q96E14 147 aa11.19□□□□□ -0.62
RTN1-209ENST00000611068 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
RTN1-209ENST00000611068 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
RTN1-209ENST00000611068 SLPIP03973 132 aa11.18□□□□□ -0.62
RTN1-209ENST00000611068 TRBV7-6A0A0J9YX20 115 aa11.17□□□□□ -0.62
RTN1-209ENST00000611068 CCKP06307 115 aa11.17□□□□□ -0.62
RTN1-209ENST00000611068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
RTN1-209ENST00000611068 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
RTN1-209ENST00000611068 F8WEM9 126 aa11.16□□□□□ -0.62
RTN1-209ENST00000611068 COX6A2Q02221 97 aa11.16□□□□□ -0.62
RTN1-209ENST00000611068 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
RTN1-209ENST00000611068 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
RTN1-209ENST00000611068 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.62
RTN1-209ENST00000611068 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
RTN1-209ENST00000611068 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
RTN1-209ENST00000611068 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
RTN1-209ENST00000611068 DEFB130BP0DP73 79 aa11.14□□□□□ -0.63
RTN1-209ENST00000611068 DEFB130AP0DP74 79 aa11.14□□□□□ -0.63
RTN1-209ENST00000611068 LECT2O14960 151 aa11.13□□□□□ -0.63
RTN1-209ENST00000611068 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
RTN1-209ENST00000611068 KLKP1Q107X0 134 aa11.12□□□□□ -0.63
RTN1-209ENST00000611068 FAM229BQ4G0N7 80 aa11.12□□□□□ -0.63
RTN1-209ENST00000611068 SMIM11BQ8TCY0 68 aa11.12□□□□□ -0.63
RTN1-209ENST00000611068 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
RTN1-209ENST00000611068 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
RTN1-209ENST00000611068 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
RTN1-209ENST00000611068 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
RTN1-209ENST00000611068 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
RTN1-209ENST00000611068 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
RTN1-209ENST00000611068 CRPP02741 224 aa11.1□□□□□ -0.63
RTN1-209ENST00000611068 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
RTN1-209ENST00000611068 IGLV5-39A0A0G2JS06 123 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms