RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
SNX20-205ENST00000610485 TMEM141Q96I45 108 aa8.04□□□□□ -1.12
SNX20-205ENST00000610485 HSPB8Q9UJY1 196 aa8.04□□□□□ -1.12
SNX20-205ENST00000610485 A0A096LNJ9 63 aa8.03□□□□□ -1.12
SNX20-205ENST00000610485 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
SNX20-205ENST00000610485 LINC00242Q5T6M2 205 aa8.03□□□□□ -1.12
SNX20-205ENST00000610485 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
SNX20-205ENST00000610485 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
SNX20-205ENST00000610485 CYSLTR1Q9Y271 337 aa8.03□□□□□ -1.12
SNX20-205ENST00000610485 A0A087WZ39 114 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 UBE2D1P51668 147 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 KRTDAPP60985 99 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 TEX43Q6ZNM6 134 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 TOMM6Q96B49 74 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
SNX20-205ENST00000610485 A0A0J9YXV3 536 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 NDUFA1O15239 70 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 ATP5LO75964 103 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 NPSP0C0P6 89 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
SNX20-205ENST00000610485 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 AMELXQ99217 191 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
SNX20-205ENST00000610485 IGIPA6NJ69 53 aa8□□□□□ -1.13
SNX20-205ENST00000610485 C3orf79P0CE67 100 aa8□□□□□ -1.13
SNX20-205ENST00000610485 KIAA0087Q14695 138 aa8□□□□□ -1.13
SNX20-205ENST00000610485 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
SNX20-205ENST00000610485 C10orf25Q5T742 122 aa8□□□□□ -1.13
SNX20-205ENST00000610485 Q6ZN92 141 aa8□□□□□ -1.13
SNX20-205ENST00000610485 Q6ZRP5 223 aa8□□□□□ -1.13
SNX20-205ENST00000610485 C2orf88Q9BSF0 95 aa8□□□□□ -1.13
SNX20-205ENST00000610485 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
SNX20-205ENST00000610485 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
SNX20-205ENST00000610485 ERASQ7Z444 233 aa7.99□□□□□ -1.13
SNX20-205ENST00000610485 LINC01561Q8N1V8 128 aa7.99□□□□□ -1.13
SNX20-205ENST00000610485 C6orf48Q9UBA6 75 aa7.99□□□□□ -1.13
SNX20-205ENST00000610485 SYS1-DBNDD2H3BUS1 97 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 SCGB1D1O95968 90 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 ZC2HC1BQ5TFG8 222 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 SPINK6Q6UWN8 80 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 VCX2Q9H322 139 aa7.98□□□□□ -1.13
SNX20-205ENST00000610485 H0Y8G0 127 aa7.97□□□□□ -1.13
SNX20-205ENST00000610485 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
SNX20-205ENST00000610485 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
SNX20-205ENST00000610485 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
SNX20-205ENST00000610485 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
SNX20-205ENST00000610485 C20orf202A1L168 122 aa7.96□□□□□ -1.14
SNX20-205ENST00000610485 LINC01600Q96MT4 127 aa7.96□□□□□ -1.14
SNX20-205ENST00000610485 TRBV30A0A0K0K1B3 111 aa7.95□□□□□ -1.14
SNX20-205ENST00000610485 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
SNX20-205ENST00000610485 PAPPA-AS1Q5QFB9 102 aa7.95□□□□□ -1.14
SNX20-205ENST00000610485 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
SNX20-205ENST00000610485 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
SNX20-205ENST00000610485 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
SNX20-205ENST00000610485 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
SNX20-205ENST00000610485 TNXBP22105 4242 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 HERVK_113P63121 156 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 SEC11AP67812 179 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 PMVKQ15126 192 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
SNX20-205ENST00000610485 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 Q8IZM0 81 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
SNX20-205ENST00000610485 PRSS2P07478 247 aa7.91□□□□□ -1.14
SNX20-205ENST00000610485 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
SNX20-205ENST00000610485 PMCHL2Q9BQD1 86 aa7.91□□□□□ -1.14
SNX20-205ENST00000610485 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
SNX20-205ENST00000610485 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
SNX20-205ENST00000610485 ODF1Q14990 250 aa7.9□□□□□ -1.14
SNX20-205ENST00000610485 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
SNX20-205ENST00000610485 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.14
SNX20-205ENST00000610485 C12orf57Q99622 126 aa7.9□□□□□ -1.14
SNX20-205ENST00000610485 GEMIN7Q9H840 131 aaKnown RBP7.9□□□□□ -1.14
SNX20-205ENST00000610485 TOMM7Q9P0U1 55 aa7.9□□□□□ -1.14
SNX20-205ENST00000610485 F8VRH5 84 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 DPM2O94777 84 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 CKS1BP61024 79 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
SNX20-205ENST00000610485 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
SNX20-205ENST00000610485 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
SNX20-205ENST00000610485 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
SNX20-205ENST00000610485 M0QXV9 152 aa7.88□□□□□ -1.15
SNX20-205ENST00000610485 IGKCP01834 107 aa7.88□□□□□ -1.15
SNX20-205ENST00000610485 S100A12P80511 92 aa7.88□□□□□ -1.15
SNX20-205ENST00000610485 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
SNX20-205ENST00000610485 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
SNX20-205ENST00000610485 PLNP26678 52 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms