RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 FHL2Q14192 279 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 LINC01561Q8N1V8 128 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 C20orf203Q8NBC4 194 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 RPL39LQ96EH5 51 aaKnown RBP3.69□□□□□ -1.82
SSX9-202ENST00000608568 C16orf95Q9H693 158 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 C11orf21Q9P2W6 132 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 KIF25-AS1Q9Y6Z4 181 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 HYDINQ4G0P3 5121 aa3.69□□□□□ -1.82
SSX9-202ENST00000608568 IGHV3-21A0A0B4J1V1 117 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 TRBV7-6A0A0J9YX20 115 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 H7BZZ5 65 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 ERC2-IT1O76042 136 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 IGLV1-47P01700 117 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 MGPP08493 103 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 SLURP1P55000 103 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 LINC00315P59091 139 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
SSX9-202ENST00000608568 FRAS1Q86XX4 4008 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 IGLV4-3A0A075B6K6 122 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 IGLV5-45A0A087WSX0 123 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 ODF3BA8MYP8 253 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 H3BQ85 93 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 BUB1B-PAK6H3BSN5 160 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 M0R1W7 72 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 CD28P10747 220 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 C10orf99Q6UWK7 81 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 PRR15Q8IV56 129 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
SSX9-202ENST00000608568 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
SSX9-202ENST00000608568 FAM223BA6NKX1 122 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 CCKP06307 115 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 CTSGP08311 255 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 CD164Q04900 197 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 PIK3CD-AS1Q5SR53 167 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 KPRPQ5T749 579 aaPredicted RBP3.66□□□□□ -1.82
SSX9-202ENST00000608568 SUMO4Q6EEV6 95 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 Q6ZRU5 148 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 Q6ZSN1 163 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 FAM19A3Q7Z5A8 133 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 ZFAND2AQ8N6M9 145 aa3.66□□□□□ -1.82
SSX9-202ENST00000608568 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 A0A0J9YXV3 536 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 A6NDX4 124 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 IBA57-AS1B1ANH7 110 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 RNASE3P12724 160 aaKnown RBP3.65□□□□□ -1.83
SSX9-202ENST00000608568 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
SSX9-202ENST00000608568 BLCAPP62952 87 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 C18orf65Q6ZTR6 163 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
SSX9-202ENST00000608568 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 UBL5Q9BZL1 73 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 LINC00846Q9NV44 126 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
SSX9-202ENST00000608568 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 M0QY20 66 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 PDE6GP18545 87 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 C20orf197Q8N268 126 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 Q8N2B8 174 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
SSX9-202ENST00000608568 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 LYRM9A8MSI8 78 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 KLLNB2CW77 178 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 K7EIL1 84 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 TRBV12-3P01733 135 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 CRPP02741 224 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 VPREB1P12018 145 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 KRTAP10-11P60412 298 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 FAM19A1Q7Z5A9 133 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 FAM223AQ8IWN6 122 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 ORMDL1Q9P0S3 153 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 DPM3Q9P2X0 92 aa3.63□□□□□ -1.83
SSX9-202ENST00000608568 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.63□□□□□ -1.83
SSX9-202ENST00000608568 IGHV3-72A0A0B4J1Y9 119 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 A0A0U1RQV1 116 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 APELAP0DMC3 54 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 CXCL6P80162 114 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 RBM3P98179 157 aaKnown RBP3.62□□□□□ -1.83
SSX9-202ENST00000608568 IGFL4Q6B9Z1 124 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
SSX9-202ENST00000608568 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
SSX9-202ENST00000608568 VPS13DQ5THJ4 4388 aa3.61□□□□□ -1.83
SSX9-202ENST00000608568 A0A087WVE0 104 aa3.61□□□□□ -1.83
SSX9-202ENST00000608568 TRAV12-3A0A0B4J271 114 aa3.61□□□□□ -1.83
SSX9-202ENST00000608568 F6UB75 175 aa3.61□□□□□ -1.83
SSX9-202ENST00000608568 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
SSX9-202ENST00000608568 PRR9Q5T870 116 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms