RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 DEFB114Q30KQ6 69 aa8.65□□□□□ -1.02
CDCA3-212ENST00000604599 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
CDCA3-212ENST00000604599 POLQO75417 2590 aa8.65□□□□□ -1.02
CDCA3-212ENST00000604599 MAPK1IP1LQ8NDC0 245 aa8.65□□□□□ -1.03
CDCA3-212ENST00000604599 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
CDCA3-212ENST00000604599 M0R2N4 97 aa8.64□□□□□ -1.03
CDCA3-212ENST00000604599 HAMPP81172 84 aa8.64□□□□□ -1.03
CDCA3-212ENST00000604599 RMI2Q96E14 147 aa8.64□□□□□ -1.03
CDCA3-212ENST00000604599 TRBV10-3A0A0K0K1G6 114 aa8.64□□□□□ -1.03
CDCA3-212ENST00000604599 CLPSL2Q6UWE3 100 aa8.64□□□□□ -1.03
CDCA3-212ENST00000604599 AKAP9Q99996 3911 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 TRAV10A0A0B4J240 114 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-212ENST00000604599 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 PLA2G2AP14555 144 aa8.63□□□□□ -1.03
CDCA3-212ENST00000604599 LINC00959A0A1B0GUT2 108 aa8.62□□□□□ -1.03
CDCA3-212ENST00000604599 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
CDCA3-212ENST00000604599 UTP20O75691 2785 aaKnown RBP8.62□□□□□ -1.03
CDCA3-212ENST00000604599 CENPEQ02224 2701 aa8.62□□□□□ -1.03
CDCA3-212ENST00000604599 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
CDCA3-212ENST00000604599 PRO0628Q9UI54 55 aa8.62□□□□□ -1.03
CDCA3-212ENST00000604599 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
CDCA3-212ENST00000604599 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-212ENST00000604599 FN1P02751 2386 aaKnown RBP8.61□□□□□ -1.03
CDCA3-212ENST00000604599 F8WEM9 126 aa8.61□□□□□ -1.03
CDCA3-212ENST00000604599 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
CDCA3-212ENST00000604599 EPG5Q9HCE0 2579 aa8.61□□□□□ -1.03
CDCA3-212ENST00000604599 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
CDCA3-212ENST00000604599 Q6ZQT0 140 aa8.6□□□□□ -1.03
CDCA3-212ENST00000604599 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
CDCA3-212ENST00000604599 ANKRD17O75179 2603 aaKnown RBP8.6□□□□□ -1.03
CDCA3-212ENST00000604599 WFDC11Q8NEX6 87 aa8.6□□□□□ -1.03
CDCA3-212ENST00000604599 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
CDCA3-212ENST00000604599 PTPN13Q12923 2485 aa8.6□□□□□ -1.03
CDCA3-212ENST00000604599 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-212ENST00000604599 GNLYP22749 145 aa8.59□□□□□ -1.03
CDCA3-212ENST00000604599 Q6ZVQ6 151 aa8.59□□□□□ -1.03
CDCA3-212ENST00000604599 FLNCQ14315 2725 aa8.59□□□□□ -1.03
CDCA3-212ENST00000604599 CACNA1AO00555 2505 aa8.59□□□□□ -1.03
CDCA3-212ENST00000604599 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.04
CDCA3-212ENST00000604599 PLAC8L1A1L4L8 177 aa8.58□□□□□ -1.04
CDCA3-212ENST00000604599 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-212ENST00000604599 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
CDCA3-212ENST00000604599 Q8NDZ9 215 aa8.58□□□□□ -1.04
CDCA3-212ENST00000604599 PKIGQ9Y2B9 76 aa8.58□□□□□ -1.04
CDCA3-212ENST00000604599 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 SPATA3Q8NHX4 192 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 C4orf3Q8WVX3 66 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 J3QLI3 93 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 Q8IZM0 81 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 LRRK2Q5S007 2527 aa8.57□□□□□ -1.04
CDCA3-212ENST00000604599 PKD1L2Q7Z442 2459 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 LINC00575Q6W349 94 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 MYO18BQ8IUG5 2567 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 CR1P17927 2039 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
CDCA3-212ENST00000604599 Q6YL49 198 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 Q8N3U1 123 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
CDCA3-212ENST00000604599 NF1P21359 2839 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 TEX15Q9BXT5 2789 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 A0A1W2PRX2 142 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 C16orf74Q96GX8 76 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
CDCA3-212ENST00000604599 GIG44P09565 113 aaPredicted RBP8.55□□□□□ -1.04
CDCA3-212ENST00000604599 SONP18583 2426 aaKnown RBP8.54□□□□□ -1.04
CDCA3-212ENST00000604599 FAM208BQ5VWN6 2430 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 BCE1O60756 84 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 CFAP46Q8IYW2 2715 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 ACACBO00763 2458 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
CDCA3-212ENST00000604599 A0A096LPF7 62 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 TRBV7-6A0A0J9YX20 115 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 LINC00269Q8N2A0 174 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 APCP25054 2843 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 Q6ZQY7 126 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 C6orf223Q8N319 242 aa8.53□□□□□ -1.04
CDCA3-212ENST00000604599 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.04
CDCA3-212ENST00000604599 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
CDCA3-212ENST00000604599 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
CDCA3-212ENST00000604599 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
CDCA3-212ENST00000604599 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
CDCA3-212ENST00000604599 BRK1Q8WUW1 75 aa8.5□□□□□ -1.05
CDCA3-212ENST00000604599 DOPEY1Q5JWR5 2465 aa8.5□□□□□ -1.05
CDCA3-212ENST00000604599 PRB1P04280 392 aa8.5□□□□□ -1.05
CDCA3-212ENST00000604599 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
CDCA3-212ENST00000604599 CXCL6P80162 114 aa8.5□□□□□ -1.05
CDCA3-212ENST00000604599 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms