RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-215ENST00000602164 IGLC3P0DOY3 106 aa16.85■□□□□ 0.29
USF2-215ENST00000602164 PACRGQ96M98 296 aaPredicted RBP16.85■□□□□ 0.29
USF2-215ENST00000602164 TOMM7Q9P0U1 55 aa16.85■□□□□ 0.29
USF2-215ENST00000602164 TRBV30A0A0K0K1B3 111 aa16.84■□□□□ 0.29
USF2-215ENST00000602164 SCO1O75880 301 aa16.84■□□□□ 0.29
USF2-215ENST00000602164 PKHD1L1Q86WI1 4243 aa16.83■□□□□ 0.29
USF2-215ENST00000602164 LINC00310P59036 64 aa16.83■□□□□ 0.28
USF2-215ENST00000602164 PRSS2P07478 247 aa16.82■□□□□ 0.28
USF2-215ENST00000602164 Q6ZRP5 223 aa16.82■□□□□ 0.28
USF2-215ENST00000602164 NDUFA6P56556 154 aa16.81■□□□□ 0.28
USF2-215ENST00000602164 BAGE3Q86Y29 109 aa16.81■□□□□ 0.28
USF2-215ENST00000602164 A0A1W2PNN7 141 aa16.8■□□□□ 0.28
USF2-215ENST00000602164 C6orf226Q5I0X4 101 aa16.8■□□□□ 0.28
USF2-215ENST00000602164 SPINK8P0C7L1 97 aa16.79■□□□□ 0.28
USF2-215ENST00000602164 C9orf116Q5BN46 136 aaPredicted RBP16.79■□□□□ 0.28
USF2-215ENST00000602164 HSBP1O75506 76 aa16.78■□□□□ 0.28
USF2-215ENST00000602164 ZNF22P17026 224 aaPredicted RBP16.78■□□□□ 0.28
USF2-215ENST00000602164 HNRNPA3P51991 378 aaKnown RBP16.78■□□□□ 0.28
USF2-215ENST00000602164 CKS1BP61024 79 aa16.78■□□□□ 0.28
USF2-215ENST00000602164 SERF1AO75920 110 aa16.77■□□□□ 0.28
USF2-215ENST00000602164 FAM19A2Q8N3H0 131 aa16.77■□□□□ 0.28
USF2-215ENST00000602164 C7orf33Q8WU49 177 aa16.77■□□□□ 0.28
USF2-215ENST00000602164 COX7B2Q8TF08 81 aa16.76■□□□□ 0.27
USF2-215ENST00000602164 NDUFC2-KCTD14E9PQ53 114 aa16.75■□□□□ 0.27
USF2-215ENST00000602164 CXCL5P42830 114 aa16.75■□□□□ 0.27
USF2-215ENST00000602164 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
USF2-215ENST00000602164 IGLV5-39A0A0G2JS06 123 aa16.74■□□□□ 0.27
USF2-215ENST00000602164 C11orf86A6NJI1 115 aa16.74■□□□□ 0.27
USF2-215ENST00000602164 F8VRH5 84 aa16.74■□□□□ 0.27
USF2-215ENST00000602164 H3BRM9 83 aa16.74■□□□□ 0.27
USF2-215ENST00000602164 GAGE2EQ4V326 116 aa16.73■□□□□ 0.27
USF2-215ENST00000602164 GAGE2DQ9UEU5 116 aa16.73■□□□□ 0.27
USF2-215ENST00000602164 TRAV12-1A0A0B4J245 112 aa16.72■□□□□ 0.27
USF2-215ENST00000602164 NUPR1O60356 82 aa16.72■□□□□ 0.27
USF2-215ENST00000602164 CHTOPQ9Y3Y2 248 aaKnown RBP16.71■□□□□ 0.27
USF2-215ENST00000602164 FAM168BA1KXE4 195 aa16.7■□□□□ 0.26
USF2-215ENST00000602164 PRR3P79522 188 aaKnown RBP16.7■□□□□ 0.26
USF2-215ENST00000602164 KRTAP7-1Q8IUC3 87 aa16.7■□□□□ 0.26
USF2-215ENST00000602164 C9orf129Q5T035 196 aaKnown RBP16.69■□□□□ 0.26
USF2-215ENST00000602164 LRP1Q07954 4544 aaKnown RBP16.66■□□□□ 0.26
USF2-215ENST00000602164 FAT3Q8TDW7 4589 aa16.66■□□□□ 0.26
USF2-215ENST00000602164 TMEM170BQ5T4T1 132 aa16.65■□□□□ 0.26
USF2-215ENST00000602164 PHF5AQ7RTV0 110 aaKnown RBP16.65■□□□□ 0.26
USF2-215ENST00000602164 HIST1H2BKO60814 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 LEPROTL1O95214 131 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BJP06899 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BOP23527 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BBP33778 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BDP58876 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BCP62807 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST2H2BEQ16778 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BHQ93079 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BNQ99877 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 HIST1H2BMQ99879 126 aa16.64■□□□□ 0.25
USF2-215ENST00000602164 DMBT1Q9UGM3 2413 aaPredicted RBP16.64■□□□□ 0.25
USF2-215ENST00000602164 FAM19A5Q7Z5A7 132 aaPredicted RBP16.63■□□□□ 0.25
USF2-215ENST00000602164 KRTAP29-1A8MX34 341 aaPredicted RBP16.62■□□□□ 0.25
USF2-215ENST00000602164 ODF1Q14990 250 aa16.62■□□□□ 0.25
USF2-215ENST00000602164 XAGE1AQ9HD64 81 aa16.6■□□□□ 0.25
USF2-215ENST00000602164 TMEM223A0PJW6 202 aa16.59■□□□□ 0.25
USF2-215ENST00000602164 HERC1Q15751 4861 aa16.59■□□□□ 0.25
USF2-215ENST00000602164 SERTAD4-AS1Q5TG53 156 aa16.57■□□□□ 0.24
USF2-215ENST00000602164 KRTAP11-1Q8IUC1 163 aa16.57■□□□□ 0.24
USF2-215ENST00000602164 HSPB8Q9UJY1 196 aa16.57■□□□□ 0.24
USF2-215ENST00000602164 M0QXV9 152 aa16.56■□□□□ 0.24
USF2-215ENST00000602164 FABP4P15090 132 aa16.56■□□□□ 0.24
USF2-215ENST00000602164 PSORS1C2Q9UIG4 136 aa16.56■□□□□ 0.24
USF2-215ENST00000602164 H0Y8G0 127 aa16.55■□□□□ 0.24
USF2-215ENST00000602164 ZNF625Q96I27 306 aaPredicted RBP16.55■□□□□ 0.24
USF2-215ENST00000602164 OXTP01178 125 aa16.54■□□□□ 0.24
USF2-215ENST00000602164 SRSF9Q13242 221 aaKnown RBP eCLIP16.5■□□□□ 0.23
USF2-215ENST00000602164 ERG28Q9UKR5 140 aa16.5■□□□□ 0.23
USF2-215ENST00000602164 J3QL48 77 aa16.49■□□□□ 0.23
USF2-215ENST00000602164 SFTA2Q6UW10 78 aa16.49■□□□□ 0.23
USF2-215ENST00000602164 S100A1P23297 94 aa16.48■□□□□ 0.23
USF2-215ENST00000602164 PFN2P35080 140 aa16.48■□□□□ 0.23
USF2-215ENST00000602164 C22orf24Q9Y442 160 aa16.48■□□□□ 0.23
USF2-215ENST00000602164 ATP6V1G1O75348 118 aa16.47■□□□□ 0.23
USF2-215ENST00000602164 PLNP26678 52 aa16.47■□□□□ 0.23
USF2-215ENST00000602164 COA6Q5JTJ3 125 aaKnown RBP16.47■□□□□ 0.23
USF2-215ENST00000602164 PLA2G2DQ9UNK4 145 aa16.47■□□□□ 0.23
USF2-215ENST00000602164 C1orf137Q5JT78 98 aa16.46■□□□□ 0.23
USF2-215ENST00000602164 PMCHL2Q9BQD1 86 aa16.46■□□□□ 0.23
USF2-215ENST00000602164 COX17Q14061 63 aa16.45■□□□□ 0.22
USF2-215ENST00000602164 SPINK6Q6UWN8 80 aa16.45■□□□□ 0.22
USF2-215ENST00000602164 MAP1LC3CQ9BXW4 147 aa16.45■□□□□ 0.22
USF2-215ENST00000602164 TP73-AS1Q9UF72 201 aa16.45■□□□□ 0.22
USF2-215ENST00000602164 DPM2O94777 84 aa16.44■□□□□ 0.22
USF2-215ENST00000602164 UBE2BP63146 152 aa16.43■□□□□ 0.22
USF2-215ENST00000602164 IGLV5-37A0A075B6J1 123 aa16.42■□□□□ 0.22
USF2-215ENST00000602164 SND1-IT1Q9HBX3 110 aa16.42■□□□□ 0.22
USF2-215ENST00000602164 TSPEAR-AS2P59090 65 aa16.41■□□□□ 0.22
USF2-215ENST00000602164 SYS1-DBNDD2H3BUS1 97 aa16.4■□□□□ 0.22
USF2-215ENST00000602164 IGKCP01834 107 aa16.4■□□□□ 0.22
USF2-215ENST00000602164 IGLV7-43P04211 117 aa16.4■□□□□ 0.22
USF2-215ENST00000602164 MT1HL1P0DM35 61 aa16.4■□□□□ 0.22
USF2-215ENST00000602164 MRPL55Q7Z7F7 128 aaKnown RBP16.4■□□□□ 0.22
USF2-215ENST00000602164 LBHQ53QV2 105 aaPredicted RBP16.39■□□□□ 0.21
USF2-215ENST00000602164 LEPROTO15243 131 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms