RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	C2CD3	Q4AC94	2353 aa		11.59	□□□□□ -0.55
CAPN12-211	ENST00000601685	TRGV4	A0A0C4DH28	118 aa		11.58	□□□□□ -0.56
CAPN12-211	ENST00000601685	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.58	□□□□□ -0.56
CAPN12-211	ENST00000601685	USP17L23	D6RBM5	183 aa		11.58	□□□□□ -0.56
CAPN12-211	ENST00000601685	CCK	P06307	115 aa		11.58	□□□□□ -0.56
CAPN12-211	ENST00000601685	LINC00167	Q96N53	147 aa		11.57	□□□□□ -0.56
CAPN12-211	ENST00000601685	TMEM258	P61165	79 aa		11.56	□□□□□ -0.56
CAPN12-211	ENST00000601685	NF1	P21359	2839 aa		11.56	□□□□□ -0.56
CAPN12-211	ENST00000601685	LINC00959	A0A1B0GUT2	108 aa		11.55	□□□□□ -0.56
CAPN12-211	ENST00000601685	C6orf226	Q5I0X4	101 aa		11.55	□□□□□ -0.56
CAPN12-211	ENST00000601685	FHL2	Q14192	279 aa		11.55	□□□□□ -0.56
CAPN12-211	ENST00000601685	C11orf68	Q9H3H3	251 aa	Known RBP	11.54	□□□□□ -0.56
CAPN12-211	ENST00000601685	CCL24	O00175	119 aa		11.54	□□□□□ -0.56
CAPN12-211	ENST00000601685	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.53	□□□□□ -0.56
CAPN12-211	ENST00000601685	S100A7L2	Q5SY68	101 aa		11.53	□□□□□ -0.56
CAPN12-211	ENST00000601685	JMJD1C	Q15652	2540 aa		11.52	□□□□□ -0.56
CAPN12-211	ENST00000601685	UBR5	O95071	2799 aa	Predicted RBP	11.52	□□□□□ -0.56
CAPN12-211	ENST00000601685	PLA2G2A	P14555	144 aa		11.52	□□□□□ -0.56
CAPN12-211	ENST00000601685	TMEM86B	Q8N661	226 aa		11.52	□□□□□ -0.56
CAPN12-211	ENST00000601685	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.52	□□□□□ -0.57
CAPN12-211	ENST00000601685	SMIM9	A6NGZ8	99 aa		11.52	□□□□□ -0.57
CAPN12-211	ENST00000601685	DNAJC9-AS1	A6NH13	148 aa		11.52	□□□□□ -0.57
CAPN12-211	ENST00000601685	NANOS2	P60321	138 aa	Known RBP	11.52	□□□□□ -0.57
CAPN12-211	ENST00000601685	DPH3	Q96FX2	82 aa		11.52	□□□□□ -0.57
CAPN12-211	ENST00000601685	KRTAP1-3	Q8IUG1	177 aa		11.51	□□□□□ -0.57
CAPN12-211	ENST00000601685		Q8N814	137 aa		11.51	□□□□□ -0.57
CAPN12-211	ENST00000601685	CMC4	P56277	68 aa	Predicted RBP	11.51	□□□□□ -0.57
CAPN12-211	ENST00000601685	KIR2DL5B	Q8NHK3	375 aa		11.51	□□□□□ -0.57
CAPN12-211	ENST00000601685	RPL35A	P18077	110 aa	Known RBP	11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685		Q8IZM0	81 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	CSNK1G2-AS1	Q8NCQ2	148 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	WFDC10A	Q9H1F0	79 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	CCDC168	Q8NDH2	2452 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	C5orf47	Q569G3	176 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	ATP5EP2	Q5VTU8	51 aa		11.5	□□□□□ -0.57
CAPN12-211	ENST00000601685	NIPBL	Q6KC79	2804 aa	eCLIP	11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	XCL1	P47992	114 aa		11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	ITPR3	Q14573	2671 aa		11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	APC	P25054	2843 aa		11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	TMEM256-PLSCR3	K7ERE1	68 aa		11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	ESM1	Q9NQ30	184 aa		11.49	□□□□□ -0.57
CAPN12-211	ENST00000601685	HILS1	P60008	231 aa		11.48	□□□□□ -0.57
CAPN12-211	ENST00000601685	NBPF19	A0A087WUL8	3843 aa		11.48	□□□□□ -0.57
CAPN12-211	ENST00000601685	LYPD5	Q6UWN5	251 aa		11.48	□□□□□ -0.57
CAPN12-211	ENST00000601685	PRR3	P79522	188 aa	Known RBP	11.47	□□□□□ -0.57
CAPN12-211	ENST00000601685	ZNF843	Q8N446	348 aa		11.47	□□□□□ -0.57
CAPN12-211	ENST00000601685	C19orf73	Q9NVV2	129 aa		11.47	□□□□□ -0.57
CAPN12-211	ENST00000601685	NDUFC2	O95298	119 aa		11.46	□□□□□ -0.57
CAPN12-211	ENST00000601685	WFDC11	Q8NEX6	87 aa		11.46	□□□□□ -0.57
CAPN12-211	ENST00000601685	SETX	Q7Z333	2677 aa	Known RBP	11.46	□□□□□ -0.57
CAPN12-211	ENST00000601685	GHRH	P01286	108 aa		11.45	□□□□□ -0.58
CAPN12-211	ENST00000601685	WFDC9	Q8NEX5	89 aa		11.45	□□□□□ -0.58
CAPN12-211	ENST00000601685	DSCR8	Q96T75	97 aa		11.45	□□□□□ -0.58
CAPN12-211	ENST00000601685		A0A1B0GUV1	79 aa		11.44	□□□□□ -0.58
CAPN12-211	ENST00000601685	FAM19A1	Q7Z5A9	133 aa		11.44	□□□□□ -0.58
CAPN12-211	ENST00000601685	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.44	□□□□□ -0.58
CAPN12-211	ENST00000601685	OXT	P01178	125 aa		11.43	□□□□□ -0.58
CAPN12-211	ENST00000601685	ENHO	Q6UWT2	76 aa		11.43	□□□□□ -0.58
CAPN12-211	ENST00000601685	FLNA	P21333	2647 aa	Known RBP	11.43	□□□□□ -0.58
CAPN12-211	ENST00000601685	TRAV23DV6	A0A075B6W5	121 aa		11.43	□□□□□ -0.58
CAPN12-211	ENST00000601685	TRBV10-3	A0A0K0K1G6	114 aa		11.43	□□□□□ -0.58
CAPN12-211	ENST00000601685	COX17	Q14061	63 aa		11.42	□□□□□ -0.58
CAPN12-211	ENST00000601685	CLPSL2	Q6UWE3	100 aa		11.42	□□□□□ -0.58
CAPN12-211	ENST00000601685	GYPE	P15421	78 aa		11.41	□□□□□ -0.58
CAPN12-211	ENST00000601685	KIAA0087	Q14695	138 aa		11.41	□□□□□ -0.58
CAPN12-211	ENST00000601685	UBL5	Q9BZL1	73 aa		11.41	□□□□□ -0.58
CAPN12-211	ENST00000601685	IGLV1-51	P01701	117 aa		11.4	□□□□□ -0.58
CAPN12-211	ENST00000601685	DEFB130B	P0DP73	79 aa		11.4	□□□□□ -0.58
CAPN12-211	ENST00000601685	DEFB130A	P0DP74	79 aa		11.4	□□□□□ -0.58
CAPN12-211	ENST00000601685	LINC01006	Q8NI28	216 aa		11.4	□□□□□ -0.58
CAPN12-211	ENST00000601685	NDUFC2-KCTD14	E9PQ53	114 aa		11.39	□□□□□ -0.59
CAPN12-211	ENST00000601685	C6orf99	Q4VX62	202 aa		11.39	□□□□□ -0.59
CAPN12-211	ENST00000601685	LINC00575	Q6W349	94 aa		11.38	□□□□□ -0.59
CAPN12-211	ENST00000601685	LINC00612	Q8N6U2	182 aa		11.38	□□□□□ -0.59
CAPN12-211	ENST00000601685	RNASE1	P07998	156 aa	Known RBP	11.37	□□□□□ -0.59
CAPN12-211	ENST00000601685	ACAN	P16112	2415 aa		11.37	□□□□□ -0.59
CAPN12-211	ENST00000601685	IGHV4-28	A0A0C4DH34	117 aa		11.37	□□□□□ -0.59
CAPN12-211	ENST00000601685		Q8NDZ9	215 aa		11.37	□□□□□ -0.59
CAPN12-211	ENST00000601685	MTOR	P42345	2549 aa		11.36	□□□□□ -0.59
CAPN12-211	ENST00000601685	CD164L2	Q6UWJ8	174 aa		11.36	□□□□□ -0.59
CAPN12-211	ENST00000601685		Q6ZQT0	140 aa		11.36	□□□□□ -0.59
CAPN12-211	ENST00000601685	RBM3	P98179	157 aa	Known RBP	11.35	□□□□□ -0.59
CAPN12-211	ENST00000601685	C9orf116	Q5BN46	136 aa	Predicted RBP	11.35	□□□□□ -0.59
CAPN12-211	ENST00000601685	LOC110117498	A0A087WWA1	95 aa		11.34	□□□□□ -0.59
CAPN12-211	ENST00000601685	LINC00269	Q8N2A0	174 aa		11.34	□□□□□ -0.59
CAPN12-211	ENST00000601685	ZNF561-AS1	K7EIQ3	104 aa		11.34	□□□□□ -0.59
CAPN12-211	ENST00000601685	C20orf197	Q8N268	126 aa		11.34	□□□□□ -0.59
CAPN12-211	ENST00000601685	TENM4	Q6N022	2769 aa		11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685		A0A096LPF7	62 aa		11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685	FN1	P02751	2386 aa	Known RBP	11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685		Q5XG85	94 aa		11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685	C6orf223	Q8N319	242 aa		11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685	PRO0255	Q9UI72	69 aa		11.33	□□□□□ -0.6
CAPN12-211	ENST00000601685	BCE1	O60756	84 aa		11.32	□□□□□ -0.6
CAPN12-211	ENST00000601685	C16orf95	Q9H693	158 aa		11.31	□□□□□ -0.6
CAPN12-211	ENST00000601685	IGLV10-54	A0A075B6I4	117 aa		11.3	□□□□□ -0.6
CAPN12-211	ENST00000601685	C4orf26	Q17RF5	130 aa		11.3	□□□□□ -0.6
CAPN12-211	ENST00000601685	HELZ2	Q9BYK8	2649 aa	Known RBP	11.3	□□□□□ -0.6
CAPN12-211	ENST00000601685		M0R2N4	97 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms