RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
HIF3A-219ENST00000600879 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 H0Y8G0 127 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 S100A2P29034 98 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 UBE2D1P51668 147 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
HIF3A-219ENST00000600879 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 HIST3H2BBQ8N257 126 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 PACRGQ96M98 296 aaPredicted RBP6.18□□□□□ -1.42
HIF3A-219ENST00000600879 CST9LQ9H4G1 147 aa6.18□□□□□ -1.42
HIF3A-219ENST00000600879 XCL1P47992 114 aa6.17□□□□□ -1.42
HIF3A-219ENST00000600879 MAP1LC3CQ9BXW4 147 aa6.17□□□□□ -1.42
HIF3A-219ENST00000600879 A0A096LNI7 61 aa6.16□□□□□ -1.42
HIF3A-219ENST00000600879 TRAV12-1A0A0B4J245 112 aa6.16□□□□□ -1.42
HIF3A-219ENST00000600879 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
HIF3A-219ENST00000600879 CD164L2Q6UWJ8 174 aa6.16□□□□□ -1.42
HIF3A-219ENST00000600879 C15orf56Q8N910 161 aa6.16□□□□□ -1.42
HIF3A-219ENST00000600879 CHTOPQ9Y3Y2 248 aaKnown RBP6.16□□□□□ -1.42
HIF3A-219ENST00000600879 SEC11AP67812 179 aa6.15□□□□□ -1.42
HIF3A-219ENST00000600879 FOXI1Q12951 378 aa6.15□□□□□ -1.42
HIF3A-219ENST00000600879 SRSF9Q13242 221 aaKnown RBP eCLIP6.15□□□□□ -1.42
HIF3A-219ENST00000600879 LINC00242Q5T6M2 205 aa6.15□□□□□ -1.42
HIF3A-219ENST00000600879 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
HIF3A-219ENST00000600879 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
HIF3A-219ENST00000600879 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 SYS1-DBNDD2H3BUS1 97 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 COX7A2LO14548 114 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 MALP21145 153 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 KRTDAPP60985 99 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 HERVK_113P63121 156 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 C5orf38Q86SI9 138 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
HIF3A-219ENST00000600879 IGLV4-69A0A075B6H9 119 aa6.13□□□□□ -1.43
HIF3A-219ENST00000600879 F8VRH5 84 aa6.13□□□□□ -1.43
HIF3A-219ENST00000600879 IGLC3P0DOY3 106 aa6.13□□□□□ -1.43
HIF3A-219ENST00000600879 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
HIF3A-219ENST00000600879 Q6ZRP5 223 aa6.13□□□□□ -1.43
HIF3A-219ENST00000600879 LINC00469Q8N7U9 141 aa6.13□□□□□ -1.43
HIF3A-219ENST00000600879 MRPL35Q9NZE8 188 aaKnown RBP6.13□□□□□ -1.43
HIF3A-219ENST00000600879 IGHV3OR16-9A0A0B4J2B5 98 aa6.12□□□□□ -1.43
HIF3A-219ENST00000600879 C11orf86A6NJI1 115 aa6.12□□□□□ -1.43
HIF3A-219ENST00000600879 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
HIF3A-219ENST00000600879 PMCHL2Q9BQD1 86 aa6.12□□□□□ -1.43
HIF3A-219ENST00000600879 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 A0A087WZ39 114 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 DPM2O94777 84 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 APOMO95445 188 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 ZNF22P17026 224 aaPredicted RBP6.11□□□□□ -1.43
HIF3A-219ENST00000600879 TMEM170BQ5T4T1 132 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
HIF3A-219ENST00000600879 C20orf202A1L168 122 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 H3BRM9 83 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 OR10D4PQ8NGN7 298 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
HIF3A-219ENST00000600879 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
HIF3A-219ENST00000600879 IGKCP01834 107 aa6.09□□□□□ -1.43
HIF3A-219ENST00000600879 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
HIF3A-219ENST00000600879 PLNP26678 52 aa6.09□□□□□ -1.43
HIF3A-219ENST00000600879 PRR4Q16378 134 aa6.09□□□□□ -1.43
HIF3A-219ENST00000600879 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
HIF3A-219ENST00000600879 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
HIF3A-219ENST00000600879 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
HIF3A-219ENST00000600879 SPAG11BQ08648 103 aa6.08□□□□□ -1.44
HIF3A-219ENST00000600879 TOMM7Q9P0U1 55 aa6.08□□□□□ -1.44
HIF3A-219ENST00000600879 TMEM223A0PJW6 202 aa6.07□□□□□ -1.44
HIF3A-219ENST00000600879 PRSS2P07478 247 aa6.07□□□□□ -1.44
HIF3A-219ENST00000600879 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
HIF3A-219ENST00000600879 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 AKR1D1P51857 326 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 HERVK_113P61574 105 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 COX7B2Q8TF08 81 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 CARD19Q96LW7 228 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
HIF3A-219ENST00000600879 KIAA0087Q14695 138 aa6.05□□□□□ -1.44
HIF3A-219ENST00000600879 C6orf226Q5I0X4 101 aa6.05□□□□□ -1.44
HIF3A-219ENST00000600879 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
HIF3A-219ENST00000600879 Q8IZM0 81 aa6.05□□□□□ -1.44
HIF3A-219ENST00000600879 ATOH7Q8N100 152 aa6.05□□□□□ -1.44
HIF3A-219ENST00000600879 IGLV5-39A0A0G2JS06 123 aa6.04□□□□□ -1.44
HIF3A-219ENST00000600879 A0A1W2PNN7 141 aa6.04□□□□□ -1.44
HIF3A-219ENST00000600879 C2orf48Q96LS8 159 aa6.04□□□□□ -1.44
HIF3A-219ENST00000600879 CAMK2N2Q96S95 79 aa6.04□□□□□ -1.44
HIF3A-219ENST00000600879 F8WDY8 70 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 NDUFA1O15239 70 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 LEPROTO15243 131 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 PTTG1IPP53801 180 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 CKS1BP61024 79 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 SYCNQ0VAF6 134 aa6.03□□□□□ -1.44
HIF3A-219ENST00000600879 PHF5AQ7RTV0 110 aaKnown RBP6.03□□□□□ -1.44
HIF3A-219ENST00000600879 CXCL5P42830 114 aa6.02□□□□□ -1.45
HIF3A-219ENST00000600879 JOSD1Q15040 202 aaPredicted RBP6.02□□□□□ -1.45
HIF3A-219ENST00000600879 C2orf82Q6UX34 121 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms