RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
CCDC9-205ENST00000600117 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
CCDC9-205ENST00000600117 IGLV5-39A0A0G2JS06 123 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 S100A2P29034 98 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 KRTAP10-1P60331 282 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 SYCNQ0VAF6 134 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 Q5VSD8 79 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
CCDC9-205ENST00000600117 KRTDAPP60985 99 aa12.15□□□□□ -0.46
CCDC9-205ENST00000600117 LINC01545Q5VT33 79 aa12.15□□□□□ -0.46
CCDC9-205ENST00000600117 Q6ZRU5 148 aa12.15□□□□□ -0.46
CCDC9-205ENST00000600117 Q8IZM0 81 aa12.15□□□□□ -0.46
CCDC9-205ENST00000600117 CARD19Q96LW7 228 aa12.15□□□□□ -0.46
CCDC9-205ENST00000600117 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
CCDC9-205ENST00000600117 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 F8WDY8 70 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 DPM2O94777 84 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 PLNP26678 52 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 TOMM7Q9P0U1 55 aa12.14□□□□□ -0.47
CCDC9-205ENST00000600117 XGP55808 180 aa12.13□□□□□ -0.47
CCDC9-205ENST00000600117 COX7B2Q8TF08 81 aa12.13□□□□□ -0.47
CCDC9-205ENST00000600117 IGKCP01834 107 aa12.12□□□□□ -0.47
CCDC9-205ENST00000600117 C10orf25Q5T742 122 aa12.12□□□□□ -0.47
CCDC9-205ENST00000600117 C2orf82Q6UX34 121 aa12.12□□□□□ -0.47
CCDC9-205ENST00000600117 UNQ6190/PRO20217Q6UXQ8 127 aa12.12□□□□□ -0.47
CCDC9-205ENST00000600117 NDUFA1O15239 70 aa12.11□□□□□ -0.47
CCDC9-205ENST00000600117 PRSS2P07478 247 aa12.11□□□□□ -0.47
CCDC9-205ENST00000600117 C6orf226Q5I0X4 101 aa12.11□□□□□ -0.47
CCDC9-205ENST00000600117 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
CCDC9-205ENST00000600117 HMCN2Q8NDA2 5059 aa12.1□□□□□ -0.47
CCDC9-205ENST00000600117 TMA7Q9Y2S6 64 aaKnown RBP12.1□□□□□ -0.47
CCDC9-205ENST00000600117 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
CCDC9-205ENST00000600117 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
CCDC9-205ENST00000600117 CXCL5P42830 114 aa12.08□□□□□ -0.48
CCDC9-205ENST00000600117 CKS1BP61024 79 aa12.07□□□□□ -0.48
CCDC9-205ENST00000600117 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
CCDC9-205ENST00000600117 TRBV30A0A0K0K1B3 111 aa12.06□□□□□ -0.48
CCDC9-205ENST00000600117 Q6ZSA8 131 aa12.06□□□□□ -0.48
CCDC9-205ENST00000600117 DNAH8Q96JB1 4490 aa12.06□□□□□ -0.48
CCDC9-205ENST00000600117 C20orf202A1L168 122 aa12.05□□□□□ -0.48
CCDC9-205ENST00000600117 J3QL48 77 aa12.04□□□□□ -0.48
CCDC9-205ENST00000600117 PANO1I0J062 215 aa12.03□□□□□ -0.48
CCDC9-205ENST00000600117 A0A096LNI7 61 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 LEPROTO15243 131 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 HERVK_113P61574 105 aa12.02□□□□□ -0.49
CCDC9-205ENST00000600117 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
CCDC9-205ENST00000600117 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
CCDC9-205ENST00000600117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.02□□□□□ -0.49
CCDC9-205ENST00000600117 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
CCDC9-205ENST00000600117 TLX1NBP0CAT3 122 aa12.01□□□□□ -0.49
CCDC9-205ENST00000600117 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
CCDC9-205ENST00000600117 STPG4Q8N801 248 aa12.01□□□□□ -0.49
CCDC9-205ENST00000600117 PKIGQ9Y2B9 76 aa12.01□□□□□ -0.49
CCDC9-205ENST00000600117 E9PLD3 99 aa12□□□□□ -0.49
CCDC9-205ENST00000600117 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
CCDC9-205ENST00000600117 ATOH7Q8N100 152 aa12□□□□□ -0.49
CCDC9-205ENST00000600117 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
CCDC9-205ENST00000600117 AKR1D1P51857 326 aa11.99□□□□□ -0.49
CCDC9-205ENST00000600117 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
CCDC9-205ENST00000600117 Q6ZRP5 223 aa11.98□□□□□ -0.49
CCDC9-205ENST00000600117 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
CCDC9-205ENST00000600117 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
CCDC9-205ENST00000600117 J3QQQ9 107 aa11.97□□□□□ -0.49
CCDC9-205ENST00000600117 HAMPP81172 84 aa11.97□□□□□ -0.49
CCDC9-205ENST00000600117 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
CCDC9-205ENST00000600117 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
CCDC9-205ENST00000600117 SFTA2Q6UW10 78 aa11.97□□□□□ -0.49
CCDC9-205ENST00000600117 NDUFC2-KCTD14E9PQ53 114 aa11.96□□□□□ -0.49
CCDC9-205ENST00000600117 NDUFA12Q9UI09 145 aa11.96□□□□□ -0.49
CCDC9-205ENST00000600117 IGKV2D-26A0A0A0MRZ7 120 aa11.95□□□□□ -0.5
CCDC9-205ENST00000600117 ANKRD39Q53RE8 183 aa11.95□□□□□ -0.5
CCDC9-205ENST00000600117 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
CCDC9-205ENST00000600117 ERG28Q9UKR5 140 aa11.94□□□□□ -0.5
CCDC9-205ENST00000600117 LRP1Q07954 4544 aaKnown RBP11.93□□□□□ -0.5
CCDC9-205ENST00000600117 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
CCDC9-205ENST00000600117 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
CCDC9-205ENST00000600117 MAJINQ3KP22 176 aa11.93□□□□□ -0.5
CCDC9-205ENST00000600117 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
CCDC9-205ENST00000600117 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
CCDC9-205ENST00000600117 A0A087WYN8 130 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 NMUP48645 174 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 HERV-K104P63124 156 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
CCDC9-205ENST00000600117 PFN2P35080 140 aa11.91□□□□□ -0.5
CCDC9-205ENST00000600117 SERTAD4-AS1Q5TG53 156 aa11.91□□□□□ -0.5
CCDC9-205ENST00000600117 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-205ENST00000600117 JOSD1Q15040 202 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-205ENST00000600117 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
CCDC9-205ENST00000600117 FAT3Q8TDW7 4589 aa11.9□□□□□ -0.5
CCDC9-205ENST00000600117 PLAC8Q9NZF1 115 aa11.9□□□□□ -0.5
CCDC9-205ENST00000600117 COX17Q14061 63 aa11.89□□□□□ -0.51
CCDC9-205ENST00000600117 TTTY13Q9BZ97 58 aa11.89□□□□□ -0.51
CCDC9-205ENST00000600117 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
CCDC9-205ENST00000600117 DPH3Q96FX2 82 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms