RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PDZD11Q5EBL8 140 aa17.69■□□□□ 0.42
SSBP4-206ENST00000599699 CHCHD1Q96BP2 118 aaKnown RBP17.69■□□□□ 0.42
SSBP4-206ENST00000599699 TRGC2P03986 189 aa17.68■□□□□ 0.42
SSBP4-206ENST00000599699 TLX1NBP0CAT3 122 aa17.68■□□□□ 0.42
SSBP4-206ENST00000599699 Q6ZRP5 223 aa17.68■□□□□ 0.42
SSBP4-206ENST00000599699 IGLV5-45A0A087WSX0 123 aa17.67■□□□□ 0.42
SSBP4-206ENST00000599699 A0A1W2PNN7 141 aa17.67■□□□□ 0.42
SSBP4-206ENST00000599699 GAGE2EQ4V326 116 aa17.67■□□□□ 0.42
SSBP4-206ENST00000599699 C9orf116Q5BN46 136 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-206ENST00000599699 GAGE2DQ9UEU5 116 aa17.67■□□□□ 0.42
SSBP4-206ENST00000599699 SMIM1B2RUZ4 78 aa17.66■□□□□ 0.42
SSBP4-206ENST00000599699 BAGE3Q86Y29 109 aa17.66■□□□□ 0.42
SSBP4-206ENST00000599699 SPINK8P0C7L1 97 aa17.65■□□□□ 0.42
SSBP4-206ENST00000599699 H3BRM9 83 aa17.64■□□□□ 0.41
SSBP4-206ENST00000599699 HNRNPA3P51991 378 aaKnown RBP17.64■□□□□ 0.41
SSBP4-206ENST00000599699 DMBT1Q9UGM3 2413 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-206ENST00000599699 NDUFC2-KCTD14E9PQ53 114 aa17.62■□□□□ 0.41
SSBP4-206ENST00000599699 IGLC3P0DOY3 106 aa17.62■□□□□ 0.41
SSBP4-206ENST00000599699 COX7B2Q8TF08 81 aa17.62■□□□□ 0.41
SSBP4-206ENST00000599699 F8VRH5 84 aa17.61■□□□□ 0.41
SSBP4-206ENST00000599699 J3QL48 77 aa17.61■□□□□ 0.41
SSBP4-206ENST00000599699 CXCL5P42830 114 aa17.61■□□□□ 0.41
SSBP4-206ENST00000599699 COLCA2A8K830 154 aa17.6■□□□□ 0.41
SSBP4-206ENST00000599699 HSBP1O75506 76 aa17.6■□□□□ 0.41
SSBP4-206ENST00000599699 PRR3P79522 188 aaKnown RBP17.59■□□□□ 0.41
SSBP4-206ENST00000599699 FAM168BA1KXE4 195 aa17.57■□□□□ 0.4
SSBP4-206ENST00000599699 KRTAP29-1A8MX34 341 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-206ENST00000599699 FAM19A5Q7Z5A7 132 aaPredicted RBP17.56■□□□□ 0.4
SSBP4-206ENST00000599699 FAM19A2Q8N3H0 131 aa17.56■□□□□ 0.4
SSBP4-206ENST00000599699 IFI27L1Q96BM0 104 aa17.56■□□□□ 0.4
SSBP4-206ENST00000599699 ZNF22P17026 224 aaPredicted RBP17.55■□□□□ 0.4
SSBP4-206ENST00000599699 PHF5AQ7RTV0 110 aaKnown RBP17.55■□□□□ 0.4
SSBP4-206ENST00000599699 CHTOPQ9Y3Y2 248 aaKnown RBP17.55■□□□□ 0.4
SSBP4-206ENST00000599699 SCO1O75880 301 aa17.53■□□□□ 0.4
SSBP4-206ENST00000599699 PKHD1L1Q86WI1 4243 aa17.53■□□□□ 0.4
SSBP4-206ENST00000599699 C11orf86A6NJI1 115 aa17.52■□□□□ 0.4
SSBP4-206ENST00000599699 SERF1AO75920 110 aa17.52■□□□□ 0.4
SSBP4-206ENST00000599699 TMEM170BQ5T4T1 132 aa17.52■□□□□ 0.4
SSBP4-206ENST00000599699 C9orf129Q5T035 196 aaKnown RBP17.51■□□□□ 0.39
SSBP4-206ENST00000599699 OXTP01178 125 aa17.5■□□□□ 0.39
SSBP4-206ENST00000599699 TRAV12-1A0A0B4J245 112 aa17.48■□□□□ 0.39
SSBP4-206ENST00000599699 IGLV5-39A0A0G2JS06 123 aa17.48■□□□□ 0.39
SSBP4-206ENST00000599699 XAGE1AQ9HD64 81 aa17.48■□□□□ 0.39
SSBP4-206ENST00000599699 M0QXV9 152 aa17.46■□□□□ 0.39
SSBP4-206ENST00000599699 LINC00310P59036 64 aa17.46■□□□□ 0.39
SSBP4-206ENST00000599699 H0Y8G0 127 aa17.45■□□□□ 0.38
SSBP4-206ENST00000599699 LEPROTL1O95214 131 aa17.45■□□□□ 0.38
SSBP4-206ENST00000599699 PSORS1C2Q9UIG4 136 aa17.45■□□□□ 0.38
SSBP4-206ENST00000599699 KRTAP7-1Q8IUC3 87 aa17.44■□□□□ 0.38
SSBP4-206ENST00000599699 HERC1Q15751 4861 aa17.44■□□□□ 0.38
SSBP4-206ENST00000599699 LRP1Q07954 4544 aaKnown RBP17.44■□□□□ 0.38
SSBP4-206ENST00000599699 UBE2BP63146 152 aa17.42■□□□□ 0.38
SSBP4-206ENST00000599699 NUPR1O60356 82 aa17.41■□□□□ 0.38
SSBP4-206ENST00000599699 C1orf137Q5JT78 98 aa17.41■□□□□ 0.38
SSBP4-206ENST00000599699 FABP4P15090 132 aa17.4■□□□□ 0.38
SSBP4-206ENST00000599699 HSPB8Q9UJY1 196 aa17.4■□□□□ 0.38
SSBP4-206ENST00000599699 FAT3Q8TDW7 4589 aa17.39■□□□□ 0.37
SSBP4-206ENST00000599699 SERTAD4-AS1Q5TG53 156 aa17.39■□□□□ 0.37
SSBP4-206ENST00000599699 SPINK6Q6UWN8 80 aa17.39■□□□□ 0.37
SSBP4-206ENST00000599699 PFN2P35080 140 aa17.38■□□□□ 0.37
SSBP4-206ENST00000599699 TMEM223A0PJW6 202 aa17.37■□□□□ 0.37
SSBP4-206ENST00000599699 ZNF625Q96I27 306 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-206ENST00000599699 ODF1Q14990 250 aa17.35■□□□□ 0.37
SSBP4-206ENST00000599699 KRTAP11-1Q8IUC1 163 aa17.35■□□□□ 0.37
SSBP4-206ENST00000599699 C22orf24Q9Y442 160 aa17.35■□□□□ 0.37
SSBP4-206ENST00000599699 SRSF9Q13242 221 aaKnown RBP eCLIP17.34■□□□□ 0.37
SSBP4-206ENST00000599699 SFTA2Q6UW10 78 aa17.34■□□□□ 0.37
SSBP4-206ENST00000599699 HIST1H2BKO60814 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BJP06899 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BOP23527 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BBP33778 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BDP58876 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BCP62807 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST2H2BEQ16778 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 LBHQ53QV2 105 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BHQ93079 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BNQ99877 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 HIST1H2BMQ99879 126 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 ERG28Q9UKR5 140 aa17.33■□□□□ 0.36
SSBP4-206ENST00000599699 REG3GQ6UW15 175 aa17.3■□□□□ 0.36
SSBP4-206ENST00000599699 IGLV7-43P04211 117 aa17.29■□□□□ 0.36
SSBP4-206ENST00000599699 PLNP26678 52 aa17.28■□□□□ 0.36
SSBP4-206ENST00000599699 COX17Q14061 63 aa17.28■□□□□ 0.36
SSBP4-206ENST00000599699 MRPL55Q7Z7F7 128 aaKnown RBP17.28■□□□□ 0.36
SSBP4-206ENST00000599699 TP73-AS1Q9UF72 201 aa17.28■□□□□ 0.36
SSBP4-206ENST00000599699 MAP1LC3CQ9BXW4 147 aa17.27■□□□□ 0.36
SSBP4-206ENST00000599699 PLA2G2DQ9UNK4 145 aa17.27■□□□□ 0.36
SSBP4-206ENST00000599699 DPM2O94777 84 aa17.25■□□□□ 0.35
SSBP4-206ENST00000599699 NKAPP1Q8N9T2 125 aa17.25■□□□□ 0.35
SSBP4-206ENST00000599699 PMCHL2Q9BQD1 86 aa17.25■□□□□ 0.35
SSBP4-206ENST00000599699 SND1-IT1Q9HBX3 110 aa17.25■□□□□ 0.35
SSBP4-206ENST00000599699 LINC00158P58513 81 aa17.24■□□□□ 0.35
SSBP4-206ENST00000599699 GAGE10A6NGK3 116 aa17.22■□□□□ 0.35
SSBP4-206ENST00000599699 MT1HL1P0DM35 61 aa17.22■□□□□ 0.35
SSBP4-206ENST00000599699 LINC01600Q96MT4 127 aa17.22■□□□□ 0.35
SSBP4-206ENST00000599699 A0A0U1RRA0 63 aa17.21■□□□□ 0.35
SSBP4-206ENST00000599699 LINC00167Q96N53 147 aa17.21■□□□□ 0.35
SSBP4-206ENST00000599699 IGKCP01834 107 aa17.2■□□□□ 0.34
SSBP4-206ENST00000599699 DIRC1Q969H9 104 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms