RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 LINC01600Q96MT4 127 aa14.2□□□□□ -0.14
CCDC61-207ENST00000599044 PKIGQ9Y2B9 76 aa14.2□□□□□ -0.14
CCDC61-207ENST00000599044 A0A0J9YXV3 536 aa14.19□□□□□ -0.14
CCDC61-207ENST00000599044 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.19□□□□□ -0.14
CCDC61-207ENST00000599044 C2orf48Q96LS8 159 aa14.18□□□□□ -0.14
CCDC61-207ENST00000599044 APOMO95445 188 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 UBE2D1P51668 147 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 NDUFA6P56556 154 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 SRSF9Q13242 221 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC61-207ENST00000599044 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 C2orf88Q9BSF0 95 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 LRP2P98164 4655 aa14.17□□□□□ -0.14
CCDC61-207ENST00000599044 SPAG11BQ08648 103 aa14.16□□□□□ -0.14
CCDC61-207ENST00000599044 IGHV3OR16-9A0A0B4J2B5 98 aa14.15□□□□□ -0.14
CCDC61-207ENST00000599044 ATP5LO75964 103 aa14.15□□□□□ -0.14
CCDC61-207ENST00000599044 COA6Q5JTJ3 125 aaKnown RBP14.15□□□□□ -0.14
CCDC61-207ENST00000599044 LINC00242Q5T6M2 205 aa14.15□□□□□ -0.14
CCDC61-207ENST00000599044 SPINK6Q6UWN8 80 aa14.15□□□□□ -0.14
CCDC61-207ENST00000599044 Q6ZRP5 223 aa14.15□□□□□ -0.14
CCDC61-207ENST00000599044 CST9LQ9H4G1 147 aa14.14□□□□□ -0.15
CCDC61-207ENST00000599044 RPL18AQ02543 176 aaKnown RBP14.13□□□□□ -0.15
CCDC61-207ENST00000599044 PMVKQ15126 192 aa14.13□□□□□ -0.15
CCDC61-207ENST00000599044 C9orf116Q5BN46 136 aaPredicted RBP14.13□□□□□ -0.15
CCDC61-207ENST00000599044 ORAOV1Q8WV07 137 aa14.13□□□□□ -0.15
CCDC61-207ENST00000599044 C10orf25Q5T742 122 aa14.12□□□□□ -0.15
CCDC61-207ENST00000599044 OR10D4PQ8NGN7 298 aa14.12□□□□□ -0.15
CCDC61-207ENST00000599044 IFI27L1Q96BM0 104 aa14.12□□□□□ -0.15
CCDC61-207ENST00000599044 KRTAP10-8P60410 259 aa14.11□□□□□ -0.15
CCDC61-207ENST00000599044 FAM19A3Q7Z5A8 133 aa14.11□□□□□ -0.15
CCDC61-207ENST00000599044 LEPROTL1O95214 131 aa14.1□□□□□ -0.15
CCDC61-207ENST00000599044 FABP4P15090 132 aa14.1□□□□□ -0.15
CCDC61-207ENST00000599044 RNF151Q2KHN1 245 aa14.1□□□□□ -0.15
CCDC61-207ENST00000599044 PHF5AQ7RTV0 110 aaKnown RBP14.09□□□□□ -0.15
CCDC61-207ENST00000599044 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
CCDC61-207ENST00000599044 MRPL35Q9NZE8 188 aaKnown RBP14.08□□□□□ -0.16
CCDC61-207ENST00000599044 PSORS1C2Q9UIG4 136 aa14.08□□□□□ -0.16
CCDC61-207ENST00000599044 RNF213Q63HN8 5207 aa14.06□□□□□ -0.16
CCDC61-207ENST00000599044 REG3GQ6UW15 175 aa14.06□□□□□ -0.16
CCDC61-207ENST00000599044 C6orf48Q9UBA6 75 aa14.06□□□□□ -0.16
CCDC61-207ENST00000599044 FAM168BA1KXE4 195 aa14.05□□□□□ -0.16
CCDC61-207ENST00000599044 KIAA0087Q14695 138 aa14.05□□□□□ -0.16
CCDC61-207ENST00000599044 GEMIN7Q9H840 131 aaKnown RBP14.05□□□□□ -0.16
CCDC61-207ENST00000599044 HSPB8Q9UJY1 196 aa14.05□□□□□ -0.16
CCDC61-207ENST00000599044 A0A087WZ39 114 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 NDUFA1O15239 70 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 HERVK_113P63121 156 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 SEC11AP67812 179 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 KRTAP11-1Q8IUC1 163 aa14.04□□□□□ -0.16
CCDC61-207ENST00000599044 TRAV12-1A0A0B4J245 112 aa14.03□□□□□ -0.16
CCDC61-207ENST00000599044 CDKN2A-AS1Q9UH64 79 aa14.03□□□□□ -0.16
CCDC61-207ENST00000599044 F8WDY8 70 aa14.02□□□□□ -0.17
CCDC61-207ENST00000599044 H0Y8G0 127 aa14.02□□□□□ -0.17
CCDC61-207ENST00000599044 IGLC3P0DOY3 106 aa14.02□□□□□ -0.17
CCDC61-207ENST00000599044 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.17
CCDC61-207ENST00000599044 IGLV5-45A0A087WSX0 123 aa14.01□□□□□ -0.17
CCDC61-207ENST00000599044 LINC00469Q8N7U9 141 aa14.01□□□□□ -0.17
CCDC61-207ENST00000599044 C11orf86A6NJI1 115 aa14□□□□□ -0.17
CCDC61-207ENST00000599044 TLX1NBP0CAT3 122 aa14□□□□□ -0.17
CCDC61-207ENST00000599044 C1orf137Q5JT78 98 aa14□□□□□ -0.17
CCDC61-207ENST00000599044 KRTAP7-1Q8IUC3 87 aa14□□□□□ -0.17
CCDC61-207ENST00000599044 PACRGQ96M98 296 aaPredicted RBP14□□□□□ -0.17
CCDC61-207ENST00000599044 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
CCDC61-207ENST00000599044 S100A6P06703 90 aa13.98□□□□□ -0.17
CCDC61-207ENST00000599044 GAGE2EQ4V326 116 aa13.98□□□□□ -0.17
CCDC61-207ENST00000599044 LINC01561Q8N1V8 128 aa13.98□□□□□ -0.17
CCDC61-207ENST00000599044 HIST3H2BBQ8N257 126 aa13.98□□□□□ -0.17
CCDC61-207ENST00000599044 GAGE2DQ9UEU5 116 aa13.98□□□□□ -0.17
CCDC61-207ENST00000599044 F8VRH5 84 aa13.97□□□□□ -0.17
CCDC61-207ENST00000599044 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
CCDC61-207ENST00000599044 FAM19A5Q7Z5A7 132 aaPredicted RBP13.97□□□□□ -0.17
CCDC61-207ENST00000599044 MAP1LC3CQ9BXW4 147 aa13.97□□□□□ -0.17
CCDC61-207ENST00000599044 SNRPEP62304 92 aaKnown RBP13.95□□□□□ -0.18
CCDC61-207ENST00000599044 PMCHL2Q9BQD1 86 aa13.95□□□□□ -0.18
CCDC61-207ENST00000599044 SMIM1B2RUZ4 78 aa13.94□□□□□ -0.18
CCDC61-207ENST00000599044 SYS1-DBNDD2H3BUS1 97 aa13.94□□□□□ -0.18
CCDC61-207ENST00000599044 SPINK8P0C7L1 97 aa13.94□□□□□ -0.18
CCDC61-207ENST00000599044 IGLV7-43P04211 117 aa13.93□□□□□ -0.18
CCDC61-207ENST00000599044 C3orf79P0CE67 100 aa13.93□□□□□ -0.18
CCDC61-207ENST00000599044 C5orf52A6NGY3 159 aa13.92□□□□□ -0.18
CCDC61-207ENST00000599044 TMEM170BQ5T4T1 132 aa13.92□□□□□ -0.18
CCDC61-207ENST00000599044 HIST1H2BLQ99880 126 aa13.92□□□□□ -0.18
CCDC61-207ENST00000599044 TRBV30A0A0K0K1B3 111 aa13.91□□□□□ -0.18
CCDC61-207ENST00000599044 H3BRM9 83 aa13.91□□□□□ -0.18
CCDC61-207ENST00000599044 C9orf129Q5T035 196 aaKnown RBP13.91□□□□□ -0.18
CCDC61-207ENST00000599044 S100A2P29034 98 aa13.9□□□□□ -0.18
CCDC61-207ENST00000599044 KRTDAPP60985 99 aa13.9□□□□□ -0.18
CCDC61-207ENST00000599044 TOMM7Q9P0U1 55 aa13.9□□□□□ -0.18
CCDC61-207ENST00000599044 NDUFC2-KCTD14E9PQ53 114 aa13.89□□□□□ -0.19
CCDC61-207ENST00000599044 PET117Q6UWS5 81 aa13.88□□□□□ -0.19
CCDC61-207ENST00000599044 M0QXV9 152 aa13.87□□□□□ -0.19
CCDC61-207ENST00000599044 DPM2O94777 84 aa13.87□□□□□ -0.19
CCDC61-207ENST00000599044 LINC01545Q5VT33 79 aa13.87□□□□□ -0.19
CCDC61-207ENST00000599044 Q8IZM0 81 aa13.87□□□□□ -0.19
CCDC61-207ENST00000599044 TMA7Q9Y2S6 64 aaKnown RBP13.87□□□□□ -0.19
CCDC61-207ENST00000599044 IGLV5-39A0A0G2JS06 123 aa13.86□□□□□ -0.19
CCDC61-207ENST00000599044 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
CCDC61-207ENST00000599044 PRR26Q8N8Z3 221 aa13.86□□□□□ -0.19
CCDC61-207ENST00000599044 COX7B2Q8TF08 81 aa13.86□□□□□ -0.19
CCDC61-207ENST00000599044 DIRC1Q969H9 104 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms