RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 TP73-AS1Q9UF72 201 aa4.01□□□□□ -1.77
LINC00343-206ENST00000598478 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
LINC00343-206ENST00000598478 TRBV6-5A0A0K0K1A5 114 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 MAP1LC3B2A6NCE7 125 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 IFNA1P01562 189 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 PNRC1Q12796 327 aaPredicted RBP4□□□□□ -1.77
LINC00343-206ENST00000598478 Q8N377 158 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 C9orf62Q8N4C0 152 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 PLEKHB2Q96CS7 222 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 MAP1LC3BQ9GZQ8 125 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 ST20Q9HBF5 79 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 CSDC2Q9Y534 153 aaKnown RBP4□□□□□ -1.77
LINC00343-206ENST00000598478 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
LINC00343-206ENST00000598478 SPINK1P00995 79 aa3.99□□□□□ -1.77
LINC00343-206ENST00000598478 RPL32P62910 135 aaKnown RBP3.99□□□□□ -1.77
LINC00343-206ENST00000598478 PAPPA-AS1Q5QFB9 102 aa3.99□□□□□ -1.77
LINC00343-206ENST00000598478 TMUB2Q71RG4 321 aa3.99□□□□□ -1.77
LINC00343-206ENST00000598478 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
LINC00343-206ENST00000598478 IGKV2-28A0A075B6P5 120 aa3.98□□□□□ -1.77
LINC00343-206ENST00000598478 SSNA1O43805 119 aa3.98□□□□□ -1.77
LINC00343-206ENST00000598478 SCO1O75880 301 aa3.98□□□□□ -1.77
LINC00343-206ENST00000598478 IGKV2D-28P01615 120 aa3.98□□□□□ -1.77
LINC00343-206ENST00000598478 RPL35P42766 123 aaKnown RBP3.98□□□□□ -1.77
LINC00343-206ENST00000598478 POLR2KP53803 58 aaKnown RBP3.98□□□□□ -1.77
LINC00343-206ENST00000598478 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
LINC00343-206ENST00000598478 TRBV27A0A0K0K1C4 114 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 A0A1B0GV50 99 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 XKRY2A2RUG3 117 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 C9orf92A6NGG3 77 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 FCER1GP30273 86 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 RPL7L1Q6DKI1 246 aaKnown RBP3.97□□□□□ -1.77
LINC00343-206ENST00000598478 FAM19A1Q7Z5A9 133 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 CNFNQ9BYD5 112 aa3.97□□□□□ -1.77
LINC00343-206ENST00000598478 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
LINC00343-206ENST00000598478 RGS21Q2M5E4 152 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 CENPWQ5EE01 88 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 AKR1C8PQ5T2L2 129 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 ZC2HC1BQ5TFG8 222 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 FAM19A2Q8N3H0 131 aa3.96□□□□□ -1.78
LINC00343-206ENST00000598478 TGIF2-C20orf24A0A0A6YYL0 155 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 RAB19A4D1S5 217 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 Q6Q795 121 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 SMIM15Q7Z3B0 74 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 CBLN2Q8IUK8 224 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 SPRR4Q96PI1 79 aa3.95□□□□□ -1.78
LINC00343-206ENST00000598478 SLC25A20O43772 301 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 PFDN1O60925 122 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 MT2AP02795 61 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 GIPP09681 153 aaPredicted RBP3.94□□□□□ -1.78
LINC00343-206ENST00000598478 CKS1BP61024 79 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 SMAGPQ0VAQ4 97 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 FAM210AQ96ND0 272 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 TOMM7Q9P0U1 55 aa3.94□□□□□ -1.78
LINC00343-206ENST00000598478 SMKR1H3BMG3 65 aa3.93□□□□□ -1.78
LINC00343-206ENST00000598478 VCYO14598 125 aa3.93□□□□□ -1.78
LINC00343-206ENST00000598478 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
LINC00343-206ENST00000598478 MT1FP04733 61 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 HBBP68871 147 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 Q5BKY6 102 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 C6orf226Q5I0X4 101 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 SFT2D1Q8WV19 159 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
LINC00343-206ENST00000598478 TRBV20OR9-2A0A075B6H5 130 aa3.91□□□□□ -1.78
LINC00343-206ENST00000598478 BORCS7-ASMTA0A0B4J1R7 106 aa3.91□□□□□ -1.78
LINC00343-206ENST00000598478 M0R378 163 aa3.91□□□□□ -1.78
LINC00343-206ENST00000598478 GNG4P50150 75 aa3.91□□□□□ -1.78
LINC00343-206ENST00000598478 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
LINC00343-206ENST00000598478 KCNRGQ8N5I3 272 aa3.91□□□□□ -1.78
LINC00343-206ENST00000598478 FXYD6-FXYD2A0A087WZ82 144 aa3.9□□□□□ -1.79
LINC00343-206ENST00000598478 RAB4AP20338 218 aa3.9□□□□□ -1.79
LINC00343-206ENST00000598478 C11orf52Q96A22 123 aa3.9□□□□□ -1.79
LINC00343-206ENST00000598478 GNB1LQ9BYB4 327 aa3.9□□□□□ -1.79
LINC00343-206ENST00000598478 IGLV9-49A0A0B4J1Y8 123 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 F8VRH5 84 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
LINC00343-206ENST00000598478 MOBPQ13875 183 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 AMN1Q8IY45 258 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 FAM213BQ8TBF2 198 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 ALKBH7Q9BT30 221 aaPredicted RBP3.89□□□□□ -1.79
LINC00343-206ENST00000598478 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
LINC00343-206ENST00000598478 SMLR1H3BR10 107 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 RAB5BP61020 215 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 CCL20P78556 96 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 ZNF345Q14585 488 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 Q8IZM0 81 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 MBD3L1Q8WWY6 194 aa3.88□□□□□ -1.79
LINC00343-206ENST00000598478 HMSDA8MTL9 139 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 K7EN84 100 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 ARPC5O15511 151 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 Q6ZN92 141 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 SMIM12Q96EX1 92 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
LINC00343-206ENST00000598478 ZNF706Q9Y5V0 76 aaPredicted RBP3.87□□□□□ -1.79
LINC00343-206ENST00000598478 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms