RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 F8WDY8 70 aa10.46□□□□□ -0.73
PNKP-210ENST00000597965 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
PNKP-210ENST00000597965 SCGB1D1O95968 90 aa10.46□□□□□ -0.73
PNKP-210ENST00000597965 RPL18AQ02543 176 aaKnown RBP10.46□□□□□ -0.73
PNKP-210ENST00000597965 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
PNKP-210ENST00000597965 PSORS1C2Q9UIG4 136 aa10.46□□□□□ -0.73
PNKP-210ENST00000597965 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
PNKP-210ENST00000597965 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
PNKP-210ENST00000597965 A0A1W2PNN7 141 aa10.45□□□□□ -0.74
PNKP-210ENST00000597965 TCAPO15273 167 aa10.45□□□□□ -0.74
PNKP-210ENST00000597965 HSPB8Q9UJY1 196 aa10.45□□□□□ -0.74
PNKP-210ENST00000597965 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.44□□□□□ -0.74
PNKP-210ENST00000597965 HBDP02042 147 aa10.44□□□□□ -0.74
PNKP-210ENST00000597965 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
PNKP-210ENST00000597965 DIRC1Q969H9 104 aa10.44□□□□□ -0.74
PNKP-210ENST00000597965 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
PNKP-210ENST00000597965 SPAG11BQ08648 103 aa10.43□□□□□ -0.74
PNKP-210ENST00000597965 K7EMI3 77 aa10.42□□□□□ -0.74
PNKP-210ENST00000597965 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
PNKP-210ENST00000597965 SYS1-DBNDD2H3BUS1 97 aa10.41□□□□□ -0.74
PNKP-210ENST00000597965 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
PNKP-210ENST00000597965 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
PNKP-210ENST00000597965 MAP1LC3CQ9BXW4 147 aa10.41□□□□□ -0.74
PNKP-210ENST00000597965 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
PNKP-210ENST00000597965 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
PNKP-210ENST00000597965 IGLV7-43P04211 117 aa10.39□□□□□ -0.75
PNKP-210ENST00000597965 S100A12P80511 92 aa10.39□□□□□ -0.75
PNKP-210ENST00000597965 RNASE13Q5GAN3 156 aaKnown RBP10.39□□□□□ -0.75
PNKP-210ENST00000597965 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
PNKP-210ENST00000597965 NDUFA1O15239 70 aa10.38□□□□□ -0.75
PNKP-210ENST00000597965 Q6ZUT4 128 aa10.38□□□□□ -0.75
PNKP-210ENST00000597965 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
PNKP-210ENST00000597965 OPRPNQ99935 248 aaPredicted RBP10.38□□□□□ -0.75
PNKP-210ENST00000597965 A0A087WZ39 114 aa10.37□□□□□ -0.75
PNKP-210ENST00000597965 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
PNKP-210ENST00000597965 SPANXA1Q9NS26 97 aa10.37□□□□□ -0.75
PNKP-210ENST00000597965 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
PNKP-210ENST00000597965 LINC01545Q5VT33 79 aa10.36□□□□□ -0.75
PNKP-210ENST00000597965 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
PNKP-210ENST00000597965 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 C20orf202A1L168 122 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 PCP4L1A6NKN8 68 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 H0Y9J4 135 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 ATP5LO75964 103 aa10.35□□□□□ -0.75
PNKP-210ENST00000597965 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
PNKP-210ENST00000597965 PRR26Q8N8Z3 221 aa10.34□□□□□ -0.75
PNKP-210ENST00000597965 G0S2P27469 103 aa10.33□□□□□ -0.76
PNKP-210ENST00000597965 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
PNKP-210ENST00000597965 PRO1933Q9H354 126 aa10.33□□□□□ -0.76
PNKP-210ENST00000597965 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
PNKP-210ENST00000597965 ATOH7Q8N100 152 aa10.32□□□□□ -0.76
PNKP-210ENST00000597965 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
PNKP-210ENST00000597965 VAMP8Q9BV40 100 aa10.32□□□□□ -0.76
PNKP-210ENST00000597965 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
PNKP-210ENST00000597965 H0Y8G0 127 aa10.31□□□□□ -0.76
PNKP-210ENST00000597965 UBE2D1P51668 147 aa10.31□□□□□ -0.76
PNKP-210ENST00000597965 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
PNKP-210ENST00000597965 CYSLTR1Q9Y271 337 aa10.31□□□□□ -0.76
PNKP-210ENST00000597965 UBE2BP63146 152 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 ERASQ7Z444 233 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
PNKP-210ENST00000597965 PMCHL2Q9BQD1 86 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 PAM16Q9Y3D7 125 aa10.3□□□□□ -0.76
PNKP-210ENST00000597965 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
PNKP-210ENST00000597965 IGIPA6NJ69 53 aa10.29□□□□□ -0.76
PNKP-210ENST00000597965 TSTD3H0UI37 97 aa10.29□□□□□ -0.76
PNKP-210ENST00000597965 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
PNKP-210ENST00000597965 FAM168BA1KXE4 195 aa10.28□□□□□ -0.76
PNKP-210ENST00000597965 M0QXV9 152 aa10.28□□□□□ -0.76
PNKP-210ENST00000597965 SPATA45Q537H7 98 aa10.28□□□□□ -0.76
PNKP-210ENST00000597965 C6orf48Q9UBA6 75 aa10.28□□□□□ -0.76
PNKP-210ENST00000597965 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
PNKP-210ENST00000597965 NDUFC2-KCTD14E9PQ53 114 aa10.27□□□□□ -0.77
PNKP-210ENST00000597965 C10orf25Q5T742 122 aa10.27□□□□□ -0.77
PNKP-210ENST00000597965 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
PNKP-210ENST00000597965 LPAP08519 4548 aa10.27□□□□□ -0.77
PNKP-210ENST00000597965 Q6ZN92 141 aa10.26□□□□□ -0.77
PNKP-210ENST00000597965 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
PNKP-210ENST00000597965 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
PNKP-210ENST00000597965 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
PNKP-210ENST00000597965 A0A0U1RQV1 116 aa10.24□□□□□ -0.77
PNKP-210ENST00000597965 LINC00587B1AMM8 73 aa10.24□□□□□ -0.77
PNKP-210ENST00000597965 DDTP30046 118 aa10.24□□□□□ -0.77
PNKP-210ENST00000597965 LINC01561Q8N1V8 128 aa10.24□□□□□ -0.77
PNKP-210ENST00000597965 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
PNKP-210ENST00000597965 KRTAP1-4P0C5Y4 121 aa10.23□□□□□ -0.77
PNKP-210ENST00000597965 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
PNKP-210ENST00000597965 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
PNKP-210ENST00000597965 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
PNKP-210ENST00000597965 HSBP1L1C9JCN9 74 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 DPM2O94777 84 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 PRSS2P07478 247 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 PRR4Q16378 134 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 KRTAP11-1Q8IUC1 163 aa10.22□□□□□ -0.77
PNKP-210ENST00000597965 F8VRH5 84 aa10.21□□□□□ -0.77
PNKP-210ENST00000597965 IGKCP01834 107 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms