RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ERASQ7Z444 233 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 NPSP0C0P6 89 aa7.38□□□□□ -1.23
SOX2-OT-228ENST00000597828 NDUFA6P56556 154 aa7.38□□□□□ -1.23
SOX2-OT-228ENST00000597828 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
SOX2-OT-228ENST00000597828 ORAOV1Q8WV07 137 aa7.38□□□□□ -1.23
SOX2-OT-228ENST00000597828 IFITM10A6NMD0 228 aa7.37□□□□□ -1.23
SOX2-OT-228ENST00000597828 ATP5LO75964 103 aa7.37□□□□□ -1.23
SOX2-OT-228ENST00000597828 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
SOX2-OT-228ENST00000597828 PMCHL1Q16048 86 aa7.36□□□□□ -1.23
SOX2-OT-228ENST00000597828 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
SOX2-OT-228ENST00000597828 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
SOX2-OT-228ENST00000597828 IGLV4-3A0A075B6K6 122 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 SERF1AO75920 110 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 SEC11AP67812 179 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 C6orf48Q9UBA6 75 aa7.35□□□□□ -1.23
SOX2-OT-228ENST00000597828 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 S100A6P06703 90 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 FAM19A2Q8N3H0 131 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 HSPB8Q9UJY1 196 aa7.34□□□□□ -1.23
SOX2-OT-228ENST00000597828 NDUFA1O15239 70 aa7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 PMVKQ15126 192 aa7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 GAGE2EQ4V326 116 aa7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 GAGE2DQ9UEU5 116 aa7.33□□□□□ -1.24
SOX2-OT-228ENST00000597828 A0A087WZ39 114 aa7.32□□□□□ -1.24
SOX2-OT-228ENST00000597828 FABP4P15090 132 aa7.32□□□□□ -1.24
SOX2-OT-228ENST00000597828 H0Y9J4 135 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 TLX1NBP0CAT3 122 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 KIAA0087Q14695 138 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 IFI27L1Q96BM0 104 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 AMELXQ99217 191 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
SOX2-OT-228ENST00000597828 M0QXV9 152 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 S100A2P29034 98 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 HERVK_113P63121 156 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 ZC2HC1BQ5TFG8 222 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 DIRC1Q969H9 104 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
SOX2-OT-228ENST00000597828 H0Y8G0 127 aa7.29□□□□□ -1.24
SOX2-OT-228ENST00000597828 UBE2D1P51668 147 aa7.29□□□□□ -1.24
SOX2-OT-228ENST00000597828 LINC00242Q5T6M2 205 aa7.29□□□□□ -1.24
SOX2-OT-228ENST00000597828 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
SOX2-OT-228ENST00000597828 A0A096LNJ9 63 aa7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 F8WDY8 70 aa7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 NUPR1O60356 82 aa7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 C9orf129Q5T035 196 aaKnown RBP7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
SOX2-OT-228ENST00000597828 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
SOX2-OT-228ENST00000597828 H3BRM9 83 aa7.27□□□□□ -1.25
SOX2-OT-228ENST00000597828 UBE2BP63146 152 aa7.27□□□□□ -1.25
SOX2-OT-228ENST00000597828 LINC00469Q8N7U9 141 aa7.27□□□□□ -1.25
SOX2-OT-228ENST00000597828 TRAV12-1A0A0B4J245 112 aa7.26□□□□□ -1.25
SOX2-OT-228ENST00000597828 PRSS2P07478 247 aa7.26□□□□□ -1.25
SOX2-OT-228ENST00000597828 COA6Q5JTJ3 125 aaKnown RBP7.26□□□□□ -1.25
SOX2-OT-228ENST00000597828 TRBV30A0A0K0K1B3 111 aa7.25□□□□□ -1.25
SOX2-OT-228ENST00000597828 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
SOX2-OT-228ENST00000597828 LINC00310P59036 64 aa7.25□□□□□ -1.25
SOX2-OT-228ENST00000597828 FAM19A3Q7Z5A8 133 aa7.25□□□□□ -1.25
SOX2-OT-228ENST00000597828 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
SOX2-OT-228ENST00000597828 IGLV1-50A0A075B6I6 118 aa7.24□□□□□ -1.25
SOX2-OT-228ENST00000597828 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
SOX2-OT-228ENST00000597828 F8VRH5 84 aa7.23□□□□□ -1.25
SOX2-OT-228ENST00000597828 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
SOX2-OT-228ENST00000597828 TOMM7Q9P0U1 55 aa7.23□□□□□ -1.25
SOX2-OT-228ENST00000597828 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
SOX2-OT-228ENST00000597828 C20orf202A1L168 122 aa7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 IGLC3P0DOY3 106 aa7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 KRTDAPP60985 99 aa7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 CKS1BP61024 79 aa7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 SNRPEP62304 92 aaKnown RBP7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 XAGE1AQ9HD64 81 aa7.22□□□□□ -1.25
SOX2-OT-228ENST00000597828 DPM2O94777 84 aa7.21□□□□□ -1.26
SOX2-OT-228ENST00000597828 PLNP26678 52 aa7.21□□□□□ -1.26
SOX2-OT-228ENST00000597828 PRR4Q16378 134 aa7.21□□□□□ -1.26
SOX2-OT-228ENST00000597828 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms