RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
CHERP-206ENST00000597261 Q8IZM0 81 aa10.28□□□□□ -0.76
CHERP-206ENST00000597261 ATP5LO75964 103 aa10.27□□□□□ -0.77
CHERP-206ENST00000597261 Q6ZRP5 223 aa10.27□□□□□ -0.77
CHERP-206ENST00000597261 LINC00469Q8N7U9 141 aa10.27□□□□□ -0.77
CHERP-206ENST00000597261 PRSS2P07478 247 aa10.26□□□□□ -0.77
CHERP-206ENST00000597261 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
CHERP-206ENST00000597261 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
CHERP-206ENST00000597261 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
CHERP-206ENST00000597261 SMIM1B2RUZ4 78 aa10.25□□□□□ -0.77
CHERP-206ENST00000597261 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
CHERP-206ENST00000597261 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
CHERP-206ENST00000597261 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
CHERP-206ENST00000597261 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
CHERP-206ENST00000597261 CKS1BP61024 79 aa10.24□□□□□ -0.77
CHERP-206ENST00000597261 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
CHERP-206ENST00000597261 NDUFA6P56556 154 aa10.23□□□□□ -0.77
CHERP-206ENST00000597261 DMBT1Q9UGM3 2413 aaPredicted RBP10.23□□□□□ -0.77
CHERP-206ENST00000597261 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
CHERP-206ENST00000597261 NDUFC2-KCTD14E9PQ53 114 aa10.22□□□□□ -0.77
CHERP-206ENST00000597261 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
CHERP-206ENST00000597261 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
CHERP-206ENST00000597261 F8VRH5 84 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 H3BRM9 83 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 CXCL5P42830 114 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
CHERP-206ENST00000597261 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
CHERP-206ENST00000597261 SPINK8P0C7L1 97 aa10.2□□□□□ -0.78
CHERP-206ENST00000597261 TRAV12-1A0A0B4J245 112 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
CHERP-206ENST00000597261 LINC00310P59036 64 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 FAT3Q8TDW7 4589 aa10.19□□□□□ -0.78
CHERP-206ENST00000597261 FAM168BA1KXE4 195 aa10.18□□□□□ -0.78
CHERP-206ENST00000597261 HSBP1O75506 76 aa10.18□□□□□ -0.78
CHERP-206ENST00000597261 PRR3P79522 188 aaKnown RBP10.18□□□□□ -0.78
CHERP-206ENST00000597261 C9orf129Q5T035 196 aaKnown RBP10.18□□□□□ -0.78
CHERP-206ENST00000597261 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
CHERP-206ENST00000597261 SCO1O75880 301 aa10.17□□□□□ -0.78
CHERP-206ENST00000597261 OXTP01178 125 aa10.17□□□□□ -0.78
CHERP-206ENST00000597261 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
CHERP-206ENST00000597261 NUPR1O60356 82 aa10.16□□□□□ -0.78
CHERP-206ENST00000597261 SERF1AO75920 110 aa10.16□□□□□ -0.78
CHERP-206ENST00000597261 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
CHERP-206ENST00000597261 HERC1Q15751 4861 aa10.16□□□□□ -0.78
CHERP-206ENST00000597261 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHERP-206ENST00000597261 J3QL48 77 aa10.13□□□□□ -0.79
CHERP-206ENST00000597261 ODF1Q14990 250 aa10.13□□□□□ -0.79
CHERP-206ENST00000597261 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
CHERP-206ENST00000597261 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
CHERP-206ENST00000597261 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
CHERP-206ENST00000597261 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
CHERP-206ENST00000597261 FAM19A5Q7Z5A7 132 aaPredicted RBP10.11□□□□□ -0.79
CHERP-206ENST00000597261 KRTAP11-1Q8IUC1 163 aa10.11□□□□□ -0.79
CHERP-206ENST00000597261 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
CHERP-206ENST00000597261 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
CHERP-206ENST00000597261 SERTAD4-AS1Q5TG53 156 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
CHERP-206ENST00000597261 M0QXV9 152 aa10.07□□□□□ -0.8
CHERP-206ENST00000597261 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
CHERP-206ENST00000597261 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
CHERP-206ENST00000597261 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
CHERP-206ENST00000597261 FABP4P15090 132 aa10.06□□□□□ -0.8
CHERP-206ENST00000597261 COX17Q14061 63 aa10.06□□□□□ -0.8
CHERP-206ENST00000597261 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
CHERP-206ENST00000597261 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
CHERP-206ENST00000597261 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
CHERP-206ENST00000597261 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
CHERP-206ENST00000597261 PFN2P35080 140 aa10.04□□□□□ -0.8
CHERP-206ENST00000597261 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
CHERP-206ENST00000597261 H0Y8G0 127 aa10.03□□□□□ -0.8
CHERP-206ENST00000597261 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
CHERP-206ENST00000597261 TNXBP22105 4242 aa10.02□□□□□ -0.81
CHERP-206ENST00000597261 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
CHERP-206ENST00000597261 UBE2BP63146 152 aa10.02□□□□□ -0.81
CHERP-206ENST00000597261 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
CHERP-206ENST00000597261 PLNP26678 52 aa10.01□□□□□ -0.81
CHERP-206ENST00000597261 COA6Q5JTJ3 125 aaKnown RBP10.01□□□□□ -0.81
CHERP-206ENST00000597261 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
CHERP-206ENST00000597261 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
CHERP-206ENST00000597261 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
CHERP-206ENST00000597261 DPM2O94777 84 aa10□□□□□ -0.81
CHERP-206ENST00000597261 S100A1P23297 94 aa9.99□□□□□ -0.81
CHERP-206ENST00000597261 REG3GQ6UW15 175 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms