RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 DPM2O94777 84 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 C3orf79P0CE67 100 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 CXCL5P42830 114 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 HIST3H2BBQ8N257 126 aa5.36□□□□□ -1.55
VRK3-211ENST00000596445 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
VRK3-211ENST00000596445 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 IGKCP01834 107 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 S100A2P29034 98 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 XGP55808 180 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 LINC01545Q5VT33 79 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 C6orf48Q9UBA6 75 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
VRK3-211ENST00000596445 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
VRK3-211ENST00000596445 KRTDAPP60985 99 aa5.34□□□□□ -1.55
VRK3-211ENST00000596445 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
VRK3-211ENST00000596445 CIRBPQ14011 172 aaKnown RBP5.34□□□□□ -1.55
VRK3-211ENST00000596445 HIST1H2BLQ99880 126 aa5.34□□□□□ -1.55
VRK3-211ENST00000596445 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
VRK3-211ENST00000596445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
VRK3-211ENST00000596445 RYR1P21817 5038 aa5.34□□□□□ -1.56
VRK3-211ENST00000596445 A0A096LNI7 61 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 IGKV2-24A0A0C4DH68 120 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 C5orf52A6NGY3 159 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 PANO1I0J062 215 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 PTTG1IPP53801 180 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
VRK3-211ENST00000596445 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
VRK3-211ENST00000596445 HSPG2P98160 4391 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 HERVK_113P61574 105 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 HAMPP81172 84 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
VRK3-211ENST00000596445 GAGE2BQ13066 116 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 SFTA2Q6UW10 78 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 Q6ZRP5 223 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 SCXQ7RTU7 201 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 DPH3Q96FX2 82 aa5.32□□□□□ -1.56
VRK3-211ENST00000596445 C20orf202A1L168 122 aa5.31□□□□□ -1.56
VRK3-211ENST00000596445 LEPROTO15243 131 aa5.31□□□□□ -1.56
VRK3-211ENST00000596445 AKR1D1P51857 326 aa5.31□□□□□ -1.56
VRK3-211ENST00000596445 PLEKHB2Q96CS7 222 aa5.31□□□□□ -1.56
VRK3-211ENST00000596445 ZNF625Q96I27 306 aaPredicted RBP5.31□□□□□ -1.56
VRK3-211ENST00000596445 PLAC8Q9NZF1 115 aa5.31□□□□□ -1.56
VRK3-211ENST00000596445 A0A087WYN8 130 aa5.3□□□□□ -1.56
VRK3-211ENST00000596445 STPG4Q8N801 248 aa5.3□□□□□ -1.56
VRK3-211ENST00000596445 VPS13BQ7Z7G8 4022 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 E9PLD3 99 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 J3QQQ9 107 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 TSPEAR-AS2P59090 65 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 COX17Q14061 63 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 NDUFA12Q9UI09 145 aa5.29□□□□□ -1.56
VRK3-211ENST00000596445 HERC2O95714 4834 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 MYMXA0A1B0GTQ4 84 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 EPM2AB3EWF7 344 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
VRK3-211ENST00000596445 NMUP48645 174 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 HERV-K104P63124 156 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 Q8N1X5 172 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
VRK3-211ENST00000596445 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
VRK3-211ENST00000596445 A0A1W2PNN7 141 aa5.27□□□□□ -1.57
VRK3-211ENST00000596445 LGALS3P17931 250 aaKnown RBP5.27□□□□□ -1.57
VRK3-211ENST00000596445 PFN2P35080 140 aa5.27□□□□□ -1.57
VRK3-211ENST00000596445 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
VRK3-211ENST00000596445 ATOH7Q8N100 152 aa5.27□□□□□ -1.57
VRK3-211ENST00000596445 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
VRK3-211ENST00000596445 LINC00587B1AMM8 73 aa5.26□□□□□ -1.57
VRK3-211ENST00000596445 FAM229AH3BQW9 127 aa5.26□□□□□ -1.57
VRK3-211ENST00000596445 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
VRK3-211ENST00000596445 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
VRK3-211ENST00000596445 XAGE1AQ9HD64 81 aa5.26□□□□□ -1.57
VRK3-211ENST00000596445 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
VRK3-211ENST00000596445 SCGB1D1O95968 90 aa5.25□□□□□ -1.57
VRK3-211ENST00000596445 LINC00158P58513 81 aa5.25□□□□□ -1.57
VRK3-211ENST00000596445 MEIG1Q5JSS6 88 aa5.25□□□□□ -1.57
VRK3-211ENST00000596445 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 ANKRD39Q53RE8 183 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 Q5VSD8 79 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 FAM19A5Q7Z5A7 132 aaPredicted RBP5.24□□□□□ -1.57
VRK3-211ENST00000596445 C7orf33Q8WU49 177 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 SND1-IT1Q9HBX3 110 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 PLA2G2DQ9UNK4 145 aa5.24□□□□□ -1.57
VRK3-211ENST00000596445 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
VRK3-211ENST00000596445 ZNF815PA8K554 130 aa5.23□□□□□ -1.57
VRK3-211ENST00000596445 HSBP1L1C9JCN9 74 aa5.23□□□□□ -1.57
VRK3-211ENST00000596445 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
VRK3-211ENST00000596445 SERTAD4-AS1Q5TG53 156 aa5.23□□□□□ -1.57
VRK3-211ENST00000596445 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
VRK3-211ENST00000596445 FAT1Q14517 4588 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms