RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 CST9LQ9H4G1 147 aa6.41□□□□□ -1.38
NOTCH3-203ENST00000595514 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 hDV102S1A0JD36 115 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 HSBP1O75506 76 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 ATP5LO75964 103 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 FAM19A2Q8N3H0 131 aa6.4□□□□□ -1.38
NOTCH3-203ENST00000595514 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
NOTCH3-203ENST00000595514 SEC11AP67812 179 aa6.39□□□□□ -1.39
NOTCH3-203ENST00000595514 COA6Q5JTJ3 125 aaKnown RBP6.39□□□□□ -1.39
NOTCH3-203ENST00000595514 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 TINCRA0A1B0GVN0 87 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 MALP21145 153 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 HERVK_113P63121 156 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 KIAA0087Q14695 138 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 OR10D4PQ8NGN7 298 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 SPACA4Q8TDM5 124 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
NOTCH3-203ENST00000595514 TRAV12-1A0A0B4J245 112 aa6.37□□□□□ -1.39
NOTCH3-203ENST00000595514 APOMO95445 188 aa6.37□□□□□ -1.39
NOTCH3-203ENST00000595514 LINC00526Q96FQ7 95 aa6.37□□□□□ -1.39
NOTCH3-203ENST00000595514 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
NOTCH3-203ENST00000595514 PLAC8Q9NZF1 115 aa6.37□□□□□ -1.39
NOTCH3-203ENST00000595514 LEPROTL1O95214 131 aa6.36□□□□□ -1.39
NOTCH3-203ENST00000595514 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
NOTCH3-203ENST00000595514 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
NOTCH3-203ENST00000595514 ORAOV1Q8WV07 137 aa6.36□□□□□ -1.39
NOTCH3-203ENST00000595514 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
NOTCH3-203ENST00000595514 F8WDY8 70 aa6.35□□□□□ -1.39
NOTCH3-203ENST00000595514 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
NOTCH3-203ENST00000595514 PACRGQ96M98 296 aaPredicted RBP6.35□□□□□ -1.39
NOTCH3-203ENST00000595514 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
NOTCH3-203ENST00000595514 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 PRR4Q16378 134 aa6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 CARD19Q96LW7 228 aa6.34□□□□□ -1.39
NOTCH3-203ENST00000595514 F8VRH5 84 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 NDUFA6P56556 154 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 Q8IZM0 81 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 MRPL35Q9NZE8 188 aaKnown RBP6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
NOTCH3-203ENST00000595514 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
NOTCH3-203ENST00000595514 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
NOTCH3-203ENST00000595514 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
NOTCH3-203ENST00000595514 CAMK2N2Q96S95 79 aa6.32□□□□□ -1.4
NOTCH3-203ENST00000595514 NDUFA1O15239 70 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 FABP4P15090 132 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 UNQ6190/PRO20217Q6UXQ8 127 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 STPG4Q8N801 248 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
NOTCH3-203ENST00000595514 A0A096LNI7 61 aa6.3□□□□□ -1.4
NOTCH3-203ENST00000595514 H3BRM9 83 aa6.3□□□□□ -1.4
NOTCH3-203ENST00000595514 TLX1NBP0CAT3 122 aa6.3□□□□□ -1.4
NOTCH3-203ENST00000595514 C2orf82Q6UX34 121 aa6.3□□□□□ -1.4
NOTCH3-203ENST00000595514 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
NOTCH3-203ENST00000595514 TRBV30A0A0K0K1B3 111 aa6.29□□□□□ -1.4
NOTCH3-203ENST00000595514 TMEM223A0PJW6 202 aa6.29□□□□□ -1.4
NOTCH3-203ENST00000595514 CXCL5P42830 114 aa6.29□□□□□ -1.4
NOTCH3-203ENST00000595514 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
NOTCH3-203ENST00000595514 TOMM7Q9P0U1 55 aa6.29□□□□□ -1.4
NOTCH3-203ENST00000595514 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
NOTCH3-203ENST00000595514 H0Y8G0 127 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 PRSS2P07478 247 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 PTTG1IPP53801 180 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 C6orf226Q5I0X4 101 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 Q6ZRP5 223 aa6.27□□□□□ -1.41
NOTCH3-203ENST00000595514 PLNP26678 52 aa6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 CKS1BP61024 79 aa6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 C9orf116Q5BN46 136 aaPredicted RBP6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 PET117Q6UWS5 81 aa6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 LINC00474Q9P2X8 69 aa6.26□□□□□ -1.41
NOTCH3-203ENST00000595514 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
NOTCH3-203ENST00000595514 DPM2O94777 84 aa6.25□□□□□ -1.41
NOTCH3-203ENST00000595514 IGKCP01834 107 aa6.25□□□□□ -1.41
NOTCH3-203ENST00000595514 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
NOTCH3-203ENST00000595514 C5orf52A6NGY3 159 aa6.24□□□□□ -1.41
NOTCH3-203ENST00000595514 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
NOTCH3-203ENST00000595514 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
NOTCH3-203ENST00000595514 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
NOTCH3-203ENST00000595514 TSPEAR-AS2P59090 65 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms