RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 H3BRM9 83 aa14.6□□□□□ -0.07
PNKP-205ENST00000595081 Q8IZM0 81 aa14.6□□□□□ -0.07
PNKP-205ENST00000595081 C6orf48Q9UBA6 75 aa14.6□□□□□ -0.07
PNKP-205ENST00000595081 HSPB8Q9UJY1 196 aa14.6□□□□□ -0.07
PNKP-205ENST00000595081 CIRBPQ14011 172 aaKnown RBP14.59□□□□□ -0.07
PNKP-205ENST00000595081 C6orf226Q5I0X4 101 aa14.59□□□□□ -0.07
PNKP-205ENST00000595081 SPACA4Q8TDM5 124 aa14.59□□□□□ -0.07
PNKP-205ENST00000595081 LOC107984640A0A0U1RRK4 108 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 F8VRH5 84 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 CKS1BP61024 79 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 RNF151Q2KHN1 245 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 TMEM170BQ5T4T1 132 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 Q8N1X5 172 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 DPH3Q96FX2 82 aa14.57□□□□□ -0.08
PNKP-205ENST00000595081 COA6Q5JTJ3 125 aaKnown RBP14.56□□□□□ -0.08
PNKP-205ENST00000595081 COX7B2Q8TF08 81 aa14.56□□□□□ -0.08
PNKP-205ENST00000595081 PKIGQ9Y2B9 76 aa14.56□□□□□ -0.08
PNKP-205ENST00000595081 FAT1Q14517 4588 aa14.55□□□□□ -0.08
PNKP-205ENST00000595081 GAGE2BQ13066 116 aa14.55□□□□□ -0.08
PNKP-205ENST00000595081 ODF1Q14990 250 aa14.55□□□□□ -0.08
PNKP-205ENST00000595081 MAJINQ3KP22 176 aa14.55□□□□□ -0.08
PNKP-205ENST00000595081 RPL18AQ02543 176 aaKnown RBP14.54□□□□□ -0.08
PNKP-205ENST00000595081 KRTAP4-5Q9BYR2 181 aa14.54□□□□□ -0.08
PNKP-205ENST00000595081 A0A087WYN8 130 aa14.53□□□□□ -0.08
PNKP-205ENST00000595081 IGLV5-39A0A0G2JS06 123 aa14.53□□□□□ -0.08
PNKP-205ENST00000595081 TRBV30A0A0K0K1B3 111 aa14.53□□□□□ -0.08
PNKP-205ENST00000595081 PTTG1IPP53801 180 aa14.53□□□□□ -0.08
PNKP-205ENST00000595081 C9orf116Q5BN46 136 aaPredicted RBP14.53□□□□□ -0.08
PNKP-205ENST00000595081 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
PNKP-205ENST00000595081 CXCL5P42830 114 aa14.5□□□□□ -0.09
PNKP-205ENST00000595081 PMCHL2Q9BQD1 86 aa14.5□□□□□ -0.09
PNKP-205ENST00000595081 LINC00474Q9P2X8 69 aa14.5□□□□□ -0.09
PNKP-205ENST00000595081 TLX1NBP0CAT3 122 aa14.49□□□□□ -0.09
PNKP-205ENST00000595081 Q5VSD8 79 aa14.49□□□□□ -0.09
PNKP-205ENST00000595081 Q6ZRP5 223 aa14.49□□□□□ -0.09
PNKP-205ENST00000595081 LINC00528Q8N1L1 170 aa14.49□□□□□ -0.09
PNKP-205ENST00000595081 STPG4Q8N801 248 aa14.49□□□□□ -0.09
PNKP-205ENST00000595081 TMEM223A0PJW6 202 aa14.48□□□□□ -0.09
PNKP-205ENST00000595081 EPM2AB3EWF7 344 aa14.48□□□□□ -0.09
PNKP-205ENST00000595081 PLAC8Q9NZF1 115 aa14.48□□□□□ -0.09
PNKP-205ENST00000595081 GAGE2EQ4V326 116 aa14.46□□□□□ -0.09
PNKP-205ENST00000595081 GAGE2DQ9UEU5 116 aa14.46□□□□□ -0.09
PNKP-205ENST00000595081 FAM229AH3BQW9 127 aa14.45□□□□□ -0.1
PNKP-205ENST00000595081 SYS1-DBNDD2H3BUS1 97 aa14.45□□□□□ -0.1
PNKP-205ENST00000595081 PLNP26678 52 aa14.45□□□□□ -0.1
PNKP-205ENST00000595081 NDUFC2-KCTD14E9PQ53 114 aa14.44□□□□□ -0.1
PNKP-205ENST00000595081 DPM2O94777 84 aa14.44□□□□□ -0.1
PNKP-205ENST00000595081 VPS13BQ7Z7G8 4022 aa14.42□□□□□ -0.1
PNKP-205ENST00000595081 A0A1W2PNN7 141 aa14.42□□□□□ -0.1
PNKP-205ENST00000595081 IGKCP01834 107 aa14.42□□□□□ -0.1
PNKP-205ENST00000595081 C3orf79P0CE67 100 aa14.4□□□□□ -0.1
PNKP-205ENST00000595081 ABCA13Q86UQ4 5058 aa14.39□□□□□ -0.11
PNKP-205ENST00000595081 KRTDAPP60985 99 aa14.39□□□□□ -0.11
PNKP-205ENST00000595081 SRRM2Q9UQ35 2752 aaKnown RBP14.39□□□□□ -0.11
PNKP-205ENST00000595081 FAM168BA1KXE4 195 aa14.38□□□□□ -0.11
PNKP-205ENST00000595081 PET117Q6UWS5 81 aa14.38□□□□□ -0.11
PNKP-205ENST00000595081 C9orf129Q5T035 196 aaKnown RBP14.37□□□□□ -0.11
PNKP-205ENST00000595081 LINC01545Q5VT33 79 aa14.37□□□□□ -0.11
PNKP-205ENST00000595081 HIST3H2BBQ8N257 126 aa14.37□□□□□ -0.11
PNKP-205ENST00000595081 ZNF625Q96I27 306 aaPredicted RBP14.37□□□□□ -0.11
PNKP-205ENST00000595081 PLA2G1BP04054 148 aaKnown RBP14.36□□□□□ -0.11
PNKP-205ENST00000595081 XAGE1AQ9HD64 81 aa14.36□□□□□ -0.11
PNKP-205ENST00000595081 S100A6P06703 90 aa14.35□□□□□ -0.11
PNKP-205ENST00000595081 PFN2P35080 140 aa14.34□□□□□ -0.11
PNKP-205ENST00000595081 TSPEAR-AS2P59090 65 aa14.34□□□□□ -0.11
PNKP-205ENST00000595081 RPL37AP61513 92 aaKnown RBP14.34□□□□□ -0.11
PNKP-205ENST00000595081 FAM19A5Q7Z5A7 132 aaPredicted RBP14.34□□□□□ -0.11
PNKP-205ENST00000595081 KRTAP10-4P60372 401 aaPredicted RBP14.33□□□□□ -0.12
PNKP-205ENST00000595081 HERVK_113P61574 105 aa14.33□□□□□ -0.12
PNKP-205ENST00000595081 SFTA2Q6UW10 78 aa14.33□□□□□ -0.12
PNKP-205ENST00000595081 C7orf33Q8WU49 177 aa14.33□□□□□ -0.12
PNKP-205ENST00000595081 ERG28Q9UKR5 140 aa14.33□□□□□ -0.12
PNKP-205ENST00000595081 LEPROTO15243 131 aa14.32□□□□□ -0.12
PNKP-205ENST00000595081 KRTAP7-1Q8IUC3 87 aa14.32□□□□□ -0.12
PNKP-205ENST00000595081 HIST1H2BLQ99880 126 aa14.32□□□□□ -0.12
PNKP-205ENST00000595081 PCLOQ9Y6V0 5065 aa14.31□□□□□ -0.12
PNKP-205ENST00000595081 S100A2P29034 98 aa14.31□□□□□ -0.12
PNKP-205ENST00000595081 PHF5AQ7RTV0 110 aaKnown RBP14.31□□□□□ -0.12
PNKP-205ENST00000595081 PLEKHB2Q96CS7 222 aa14.3□□□□□ -0.12
PNKP-205ENST00000595081 NDUFA12Q9UI09 145 aa14.3□□□□□ -0.12
PNKP-205ENST00000595081 SNRPEP62304 92 aaKnown RBP14.29□□□□□ -0.12
PNKP-205ENST00000595081 J3QQQ9 107 aa14.28□□□□□ -0.12
PNKP-205ENST00000595081 SERTAD4-AS1Q5TG53 156 aa14.28□□□□□ -0.12
PNKP-205ENST00000595081 COX17Q14061 63 aa14.27□□□□□ -0.13
PNKP-205ENST00000595081 A0A0U1RRA0 63 aa14.26□□□□□ -0.13
PNKP-205ENST00000595081 C20orf202A1L168 122 aa14.26□□□□□ -0.13
PNKP-205ENST00000595081 INAFM2P0DMQ5 153 aa14.26□□□□□ -0.13
PNKP-205ENST00000595081 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
PNKP-205ENST00000595081 E9PLD3 99 aa14.25□□□□□ -0.13
PNKP-205ENST00000595081 M0QXV9 152 aa14.25□□□□□ -0.13
PNKP-205ENST00000595081 LGALS3P17931 250 aaKnown RBP14.25□□□□□ -0.13
PNKP-205ENST00000595081 LINC00158P58513 81 aa14.24□□□□□ -0.13
PNKP-205ENST00000595081 HERV-K104P63124 156 aa14.24□□□□□ -0.13
PNKP-205ENST00000595081 SND1-IT1Q9HBX3 110 aa14.24□□□□□ -0.13
PNKP-205ENST00000595081 C5orf52A6NGY3 159 aa14.23□□□□□ -0.13
PNKP-205ENST00000595081 SMIM13P0DJ93 91 aa14.23□□□□□ -0.13
PNKP-205ENST00000595081 MEIG1Q5JSS6 88 aa14.23□□□□□ -0.13
PNKP-205ENST00000595081 PRR3P79522 188 aaKnown RBP14.22□□□□□ -0.13
PNKP-205ENST00000595081 ATOH7Q8N100 152 aa14.22□□□□□ -0.13
PNKP-205ENST00000595081 NMUP48645 174 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 589.5 ms