RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
PNKP-204ENST00000594661 SERP1Q9Y6X1 66 aa10.92□□□□□ -0.66
PNKP-204ENST00000594661 TEP1Q99973 2627 aaKnown RBP10.92□□□□□ -0.66
PNKP-204ENST00000594661 A0A087WVE0 104 aa10.91□□□□□ -0.66
PNKP-204ENST00000594661 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
PNKP-204ENST00000594661 DNAL4O96015 105 aa10.91□□□□□ -0.66
PNKP-204ENST00000594661 UBE2D4Q9Y2X8 147 aa10.91□□□□□ -0.66
PNKP-204ENST00000594661 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
PNKP-204ENST00000594661 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
PNKP-204ENST00000594661 Q9UF83 564 aa10.9□□□□□ -0.66
PNKP-204ENST00000594661 FAM236DA0A1B0GTK5 79 aa10.9□□□□□ -0.67
PNKP-204ENST00000594661 FAM236CP0DP71 79 aa10.9□□□□□ -0.67
PNKP-204ENST00000594661 IL17DQ8TAD2 202 aa10.9□□□□□ -0.67
PNKP-204ENST00000594661 NDUFA1O15239 70 aa10.89□□□□□ -0.67
PNKP-204ENST00000594661 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
PNKP-204ENST00000594661 CYSRT1A8MQ03 144 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 RS1O15537 224 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 CSNK1G2-AS1Q8NCQ2 148 aa10.88□□□□□ -0.67
PNKP-204ENST00000594661 NOTCH3Q9UM47 2321 aa10.87□□□□□ -0.67
PNKP-204ENST00000594661 A8MZ25 164 aa10.87□□□□□ -0.67
PNKP-204ENST00000594661 TMEM243Q9BU79 118 aa10.87□□□□□ -0.67
PNKP-204ENST00000594661 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
PNKP-204ENST00000594661 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
PNKP-204ENST00000594661 COPS9Q8WXC6 57 aa10.87□□□□□ -0.67
PNKP-204ENST00000594661 SEC61GP60059 68 aa10.86□□□□□ -0.67
PNKP-204ENST00000594661 PKIGQ9Y2B9 76 aa10.85□□□□□ -0.67
PNKP-204ENST00000594661 IGHV3-38A0A0C4DH36 116 aa10.84□□□□□ -0.67
PNKP-204ENST00000594661 PLAC8L1A1L4L8 177 aa10.84□□□□□ -0.67
PNKP-204ENST00000594661 Q6ZTI0 123 aa10.84□□□□□ -0.67
PNKP-204ENST00000594661 GHRHP01286 108 aa10.83□□□□□ -0.68
PNKP-204ENST00000594661 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
PNKP-204ENST00000594661 OVOL2Q9BRP0 275 aa10.83□□□□□ -0.68
PNKP-204ENST00000594661 SOSTDC1Q6X4U4 206 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 NOP10Q9NPE3 64 aaKnown RBP10.82□□□□□ -0.68
PNKP-204ENST00000594661 C14orf132Q9NPU4 83 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 SMIM26A0A096LP01 95 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 Q9HAA7 133 aa10.82□□□□□ -0.68
PNKP-204ENST00000594661 FBN1P35555 2871 aaKnown RBP10.81□□□□□ -0.68
PNKP-204ENST00000594661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
PNKP-204ENST00000594661 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
PNKP-204ENST00000594661 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
PNKP-204ENST00000594661 XCL1P47992 114 aa10.81□□□□□ -0.68
PNKP-204ENST00000594661 V9GYY9 64 aa10.81□□□□□ -0.68
PNKP-204ENST00000594661 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
PNKP-204ENST00000594661 IGLV5-45A0A087WSX0 123 aa10.8□□□□□ -0.68
PNKP-204ENST00000594661 H7BZZ5 65 aa10.8□□□□□ -0.68
PNKP-204ENST00000594661 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
PNKP-204ENST00000594661 ATP5EP2Q5VTU8 51 aa10.8□□□□□ -0.68
PNKP-204ENST00000594661 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
PNKP-204ENST00000594661 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
PNKP-204ENST00000594661 C20orf197Q8N268 126 aa10.79□□□□□ -0.68
PNKP-204ENST00000594661 K7EQD1 137 aa10.78□□□□□ -0.68
PNKP-204ENST00000594661 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
PNKP-204ENST00000594661 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
PNKP-204ENST00000594661 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
PNKP-204ENST00000594661 C1orf195Q5TG92 126 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
PNKP-204ENST00000594661 Q9H8V8 135 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 BCE1O60756 84 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 CMYA5Q8N3K9 4069 aa10.76□□□□□ -0.69
PNKP-204ENST00000594661 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
PNKP-204ENST00000594661 LYPD5Q6UWN5 251 aa10.75□□□□□ -0.69
PNKP-204ENST00000594661 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
PNKP-204ENST00000594661 TRBV10-3A0A0K0K1G6 114 aa10.74□□□□□ -0.69
PNKP-204ENST00000594661 X6R8D5 127 aa10.74□□□□□ -0.69
PNKP-204ENST00000594661 TRAV23DV6A0A075B6W5 121 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 KLKP1Q107X0 134 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 DGAT2L7PQ6IED9 249 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 A0A087WYN8 130 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 CCKP06307 115 aa10.73□□□□□ -0.69
PNKP-204ENST00000594661 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
PNKP-204ENST00000594661 TRAV7A0A075B6U4 112 aa10.72□□□□□ -0.69
PNKP-204ENST00000594661 H0YGX0 51 aa10.71□□□□□ -0.69
PNKP-204ENST00000594661 DEFB135Q30KP9 77 aa10.71□□□□□ -0.69
PNKP-204ENST00000594661 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
PNKP-204ENST00000594661 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
PNKP-204ENST00000594661 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
PNKP-204ENST00000594661 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
PNKP-204ENST00000594661 TRGV4A0A0C4DH28 118 aa10.69□□□□□ -0.7
PNKP-204ENST00000594661 NCR3O14931 201 aa10.69□□□□□ -0.7
PNKP-204ENST00000594661 CRPP02741 224 aa10.69□□□□□ -0.7
PNKP-204ENST00000594661 APOC4P55056 127 aa10.69□□□□□ -0.7
PNKP-204ENST00000594661 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
PNKP-204ENST00000594661 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
PNKP-204ENST00000594661 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
PNKP-204ENST00000594661 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
PNKP-204ENST00000594661 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
PNKP-204ENST00000594661 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 LINC00337Q8N6G1 96 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 LINC00612Q8N6U2 182 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 KRTAP10-11P60412 298 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms