RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
HOMER3-206ENST00000594439 FLG2Q5D862 2391 aaPredicted RBP13.78□□□□□ -0.2
HOMER3-206ENST00000594439 TRBV30A0A0K0K1B3 111 aa13.78□□□□□ -0.2
HOMER3-206ENST00000594439 TLX1NBP0CAT3 122 aa13.78□□□□□ -0.2
HOMER3-206ENST00000594439 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
HOMER3-206ENST00000594439 NDUFA6P56556 154 aa13.78□□□□□ -0.2
HOMER3-206ENST00000594439 C6orf226Q5I0X4 101 aa13.77□□□□□ -0.21
HOMER3-206ENST00000594439 LINC00310P59036 64 aa13.75□□□□□ -0.21
HOMER3-206ENST00000594439 CKS1BP61024 79 aa13.75□□□□□ -0.21
HOMER3-206ENST00000594439 Q6ZRP5 223 aa13.75□□□□□ -0.21
HOMER3-206ENST00000594439 A0A1W2PNN7 141 aa13.74□□□□□ -0.21
HOMER3-206ENST00000594439 HSBP1O75506 76 aa13.74□□□□□ -0.21
HOMER3-206ENST00000594439 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
HOMER3-206ENST00000594439 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
HOMER3-206ENST00000594439 C9orf116Q5BN46 136 aaPredicted RBP13.73□□□□□ -0.21
HOMER3-206ENST00000594439 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
HOMER3-206ENST00000594439 C7orf33Q8WU49 177 aa13.73□□□□□ -0.21
HOMER3-206ENST00000594439 PKHD1L1Q86WI1 4243 aa13.72□□□□□ -0.21
HOMER3-206ENST00000594439 H3BRM9 83 aa13.72□□□□□ -0.21
HOMER3-206ENST00000594439 SERF1AO75920 110 aa13.72□□□□□ -0.21
HOMER3-206ENST00000594439 ZNF22P17026 224 aaPredicted RBP13.72□□□□□ -0.21
HOMER3-206ENST00000594439 IFI27L1Q96BM0 104 aa13.72□□□□□ -0.21
HOMER3-206ENST00000594439 C11orf86A6NJI1 115 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 NDUFC2-KCTD14E9PQ53 114 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 F8VRH5 84 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 CXCL5P42830 114 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 HNRNPA3P51991 378 aaKnown RBP13.7□□□□□ -0.22
HOMER3-206ENST00000594439 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
HOMER3-206ENST00000594439 MYCBP2O75592 4640 aa13.69□□□□□ -0.22
HOMER3-206ENST00000594439 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
HOMER3-206ENST00000594439 CHTOPQ9Y3Y2 248 aaKnown RBP13.69□□□□□ -0.22
HOMER3-206ENST00000594439 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
HOMER3-206ENST00000594439 NUPR1O60356 82 aa13.68□□□□□ -0.22
HOMER3-206ENST00000594439 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
HOMER3-206ENST00000594439 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
HOMER3-206ENST00000594439 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
HOMER3-206ENST00000594439 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
HOMER3-206ENST00000594439 TMEM170BQ5T4T1 132 aa13.64□□□□□ -0.23
HOMER3-206ENST00000594439 PHF5AQ7RTV0 110 aaKnown RBP13.63□□□□□ -0.23
HOMER3-206ENST00000594439 KRTAP7-1Q8IUC3 87 aa13.63□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BBP33778 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BDP58876 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BCP62807 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST2H2BEQ16778 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BHQ93079 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BNQ99877 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 HIST1H2BMQ99879 126 aa13.62□□□□□ -0.23
HOMER3-206ENST00000594439 FAM19A5Q7Z5A7 132 aaPredicted RBP13.61□□□□□ -0.23
HOMER3-206ENST00000594439 ODF1Q14990 250 aa13.59□□□□□ -0.23
HOMER3-206ENST00000594439 TMEM223A0PJW6 202 aa13.58□□□□□ -0.24
HOMER3-206ENST00000594439 FABP4P15090 132 aa13.58□□□□□ -0.24
HOMER3-206ENST00000594439 XAGE1AQ9HD64 81 aa13.58□□□□□ -0.24
HOMER3-206ENST00000594439 HSPB8Q9UJY1 196 aa13.58□□□□□ -0.24
HOMER3-206ENST00000594439 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
HOMER3-206ENST00000594439 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
HOMER3-206ENST00000594439 H0Y8G0 127 aa13.57□□□□□ -0.24
HOMER3-206ENST00000594439 LRP1Q07954 4544 aaKnown RBP13.56□□□□□ -0.24
HOMER3-206ENST00000594439 DMBT1Q9UGM3 2413 aaPredicted RBP13.56□□□□□ -0.24
HOMER3-206ENST00000594439 M0QXV9 152 aa13.55□□□□□ -0.24
HOMER3-206ENST00000594439 SERTAD4-AS1Q5TG53 156 aa13.54□□□□□ -0.24
HOMER3-206ENST00000594439 KRTAP11-1Q8IUC1 163 aa13.54□□□□□ -0.24
HOMER3-206ENST00000594439 PSORS1C2Q9UIG4 136 aa13.54□□□□□ -0.24
HOMER3-206ENST00000594439 OXTP01178 125 aa13.52□□□□□ -0.25
HOMER3-206ENST00000594439 S100A1P23297 94 aa13.52□□□□□ -0.25
HOMER3-206ENST00000594439 ZNF625Q96I27 306 aaPredicted RBP13.52□□□□□ -0.25
HOMER3-206ENST00000594439 ERG28Q9UKR5 140 aa13.51□□□□□ -0.25
HOMER3-206ENST00000594439 J3QL48 77 aa13.5□□□□□ -0.25
HOMER3-206ENST00000594439 PFN2P35080 140 aa13.5□□□□□ -0.25
HOMER3-206ENST00000594439 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
HOMER3-206ENST00000594439 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
HOMER3-206ENST00000594439 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.25
HOMER3-206ENST00000594439 PLNP26678 52 aa13.48□□□□□ -0.25
HOMER3-206ENST00000594439 COA6Q5JTJ3 125 aaKnown RBP13.48□□□□□ -0.25
HOMER3-206ENST00000594439 PMCHL2Q9BQD1 86 aa13.48□□□□□ -0.25
HOMER3-206ENST00000594439 MAP1LC3CQ9BXW4 147 aa13.48□□□□□ -0.25
HOMER3-206ENST00000594439 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
HOMER3-206ENST00000594439 DPM2O94777 84 aa13.47□□□□□ -0.25
HOMER3-206ENST00000594439 C1orf137Q5JT78 98 aa13.47□□□□□ -0.25
HOMER3-206ENST00000594439 PLA2G2DQ9UNK4 145 aa13.47□□□□□ -0.25
HOMER3-206ENST00000594439 UBE2BP63146 152 aa13.46□□□□□ -0.25
HOMER3-206ENST00000594439 COX17Q14061 63 aa13.46□□□□□ -0.25
HOMER3-206ENST00000594439 SPINK6Q6UWN8 80 aa13.46□□□□□ -0.25
HOMER3-206ENST00000594439 TP73-AS1Q9UF72 201 aa13.45□□□□□ -0.26
HOMER3-206ENST00000594439 IGKCP01834 107 aa13.44□□□□□ -0.26
HOMER3-206ENST00000594439 HERC1Q15751 4861 aa13.44□□□□□ -0.26
HOMER3-206ENST00000594439 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
HOMER3-206ENST00000594439 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
HOMER3-206ENST00000594439 IGLV5-37A0A075B6J1 123 aa13.42□□□□□ -0.26
HOMER3-206ENST00000594439 SYS1-DBNDD2H3BUS1 97 aa13.42□□□□□ -0.26
HOMER3-206ENST00000594439 IGLV7-43P04211 117 aa13.42□□□□□ -0.26
HOMER3-206ENST00000594439 LEPROTO15243 131 aa13.41□□□□□ -0.26
HOMER3-206ENST00000594439 TSPEAR-AS2P59090 65 aa13.41□□□□□ -0.26
HOMER3-206ENST00000594439 MRPL55Q7Z7F7 128 aaKnown RBP13.41□□□□□ -0.26
HOMER3-206ENST00000594439 NDUFA12Q9UI09 145 aa13.4□□□□□ -0.26
HOMER3-206ENST00000594439 HERV-K104P63124 156 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms