RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
DDX39A-221ENST00000593026 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
DDX39A-221ENST00000593026 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 PANO1I0J062 215 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 ODF1Q14990 250 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
DDX39A-221ENST00000593026 A0A096LNI7 61 aa9.54□□□□□ -0.88
DDX39A-221ENST00000593026 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
DDX39A-221ENST00000593026 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
DDX39A-221ENST00000593026 CHTF8P0CG12 524 aa9.54□□□□□ -0.88
DDX39A-221ENST00000593026 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
DDX39A-221ENST00000593026 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
DDX39A-221ENST00000593026 CXCL5P42830 114 aa9.53□□□□□ -0.88
DDX39A-221ENST00000593026 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
DDX39A-221ENST00000593026 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
DDX39A-221ENST00000593026 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
DDX39A-221ENST00000593026 IGLV5-39A0A0G2JS06 123 aa9.52□□□□□ -0.89
DDX39A-221ENST00000593026 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
DDX39A-221ENST00000593026 MAJINQ3KP22 176 aa9.52□□□□□ -0.89
DDX39A-221ENST00000593026 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
DDX39A-221ENST00000593026 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
DDX39A-221ENST00000593026 PLNP26678 52 aa9.51□□□□□ -0.89
DDX39A-221ENST00000593026 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
DDX39A-221ENST00000593026 TMEM223A0PJW6 202 aa9.5□□□□□ -0.89
DDX39A-221ENST00000593026 DPM2O94777 84 aa9.5□□□□□ -0.89
DDX39A-221ENST00000593026 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
DDX39A-221ENST00000593026 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
DDX39A-221ENST00000593026 Q8N1X5 172 aa9.5□□□□□ -0.89
DDX39A-221ENST00000593026 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
DDX39A-221ENST00000593026 HSPG2P98160 4391 aa9.49□□□□□ -0.89
DDX39A-221ENST00000593026 A0A087WYN8 130 aa9.49□□□□□ -0.89
DDX39A-221ENST00000593026 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
DDX39A-221ENST00000593026 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
DDX39A-221ENST00000593026 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
DDX39A-221ENST00000593026 TLX1NBP0CAT3 122 aa9.48□□□□□ -0.89
DDX39A-221ENST00000593026 Q6ZRP5 223 aa9.48□□□□□ -0.89
DDX39A-221ENST00000593026 STPG4Q8N801 248 aa9.48□□□□□ -0.89
DDX39A-221ENST00000593026 IGKCP01834 107 aa9.47□□□□□ -0.89
DDX39A-221ENST00000593026 S100A6P06703 90 aa9.47□□□□□ -0.89
DDX39A-221ENST00000593026 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
DDX39A-221ENST00000593026 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
DDX39A-221ENST00000593026 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
DDX39A-221ENST00000593026 KRTDAPP60985 99 aa9.46□□□□□ -0.9
DDX39A-221ENST00000593026 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 S100A2P29034 98 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 LINC01545Q5VT33 79 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
DDX39A-221ENST00000593026 EPM2AB3EWF7 344 aa9.44□□□□□ -0.9
DDX39A-221ENST00000593026 HERVK_113P61574 105 aa9.44□□□□□ -0.9
DDX39A-221ENST00000593026 Q5VSD8 79 aa9.44□□□□□ -0.9
DDX39A-221ENST00000593026 HIST3H2BBQ8N257 126 aa9.44□□□□□ -0.9
DDX39A-221ENST00000593026 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-221ENST00000593026 C20orf202A1L168 122 aa9.41□□□□□ -0.9
DDX39A-221ENST00000593026 PLEKHB2Q96CS7 222 aa9.41□□□□□ -0.9
DDX39A-221ENST00000593026 HIST1H2BLQ99880 126 aa9.41□□□□□ -0.9
DDX39A-221ENST00000593026 KRTAP4-5Q9BYR2 181 aa9.41□□□□□ -0.9
DDX39A-221ENST00000593026 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
DDX39A-221ENST00000593026 LEPROTO15243 131 aa9.4□□□□□ -0.9
DDX39A-221ENST00000593026 PFN2P35080 140 aa9.4□□□□□ -0.9
DDX39A-221ENST00000593026 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
DDX39A-221ENST00000593026 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
DDX39A-221ENST00000593026 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
DDX39A-221ENST00000593026 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
DDX39A-221ENST00000593026 C7orf33Q8WU49 177 aa9.39□□□□□ -0.91
DDX39A-221ENST00000593026 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
DDX39A-221ENST00000593026 NDUFA12Q9UI09 145 aa9.39□□□□□ -0.91
DDX39A-221ENST00000593026 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
DDX39A-221ENST00000593026 J3QQQ9 107 aa9.38□□□□□ -0.91
DDX39A-221ENST00000593026 TSPEAR-AS2P59090 65 aa9.38□□□□□ -0.91
DDX39A-221ENST00000593026 FAM19A5Q7Z5A7 132 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-221ENST00000593026 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
DDX39A-221ENST00000593026 MYMXA0A1B0GTQ4 84 aa9.37□□□□□ -0.91
DDX39A-221ENST00000593026 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
DDX39A-221ENST00000593026 E9PLD3 99 aa9.37□□□□□ -0.91
DDX39A-221ENST00000593026 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
DDX39A-221ENST00000593026 HERV-K104P63124 156 aa9.37□□□□□ -0.91
DDX39A-221ENST00000593026 COX17Q14061 63 aa9.37□□□□□ -0.91
DDX39A-221ENST00000593026 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
DDX39A-221ENST00000593026 FAT1Q14517 4588 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 LOC105371267A0A1B0GV96 52 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 NMUP48645 174 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 AKR1D1P51857 326 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 LINC00158P58513 81 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
DDX39A-221ENST00000593026 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 LINC00587B1AMM8 73 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 M0QXV9 152 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
DDX39A-221ENST00000593026 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
DDX39A-221ENST00000593026 SMIM13P0DJ93 91 aa9.32□□□□□ -0.92
DDX39A-221ENST00000593026 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
DDX39A-221ENST00000593026 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
DDX39A-221ENST00000593026 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms