RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 C10orf25Q5T742 122 aa9.71□□□□□ -0.86
TRIM47-206ENST00000592942 LINC00528Q8N1L1 170 aa9.71□□□□□ -0.86
TRIM47-206ENST00000592942 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
TRIM47-206ENST00000592942 CDKN2A-AS1Q9UH64 79 aa9.71□□□□□ -0.86
TRIM47-206ENST00000592942 A0A087WYN8 130 aa9.7□□□□□ -0.86
TRIM47-206ENST00000592942 A0A096LNI7 61 aa9.7□□□□□ -0.86
TRIM47-206ENST00000592942 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
TRIM47-206ENST00000592942 KRTDAPP60985 99 aa9.7□□□□□ -0.86
TRIM47-206ENST00000592942 ODF1Q14990 250 aa9.7□□□□□ -0.86
TRIM47-206ENST00000592942 F8VRH5 84 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 F8WDY8 70 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 HERVK_113P63121 156 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
TRIM47-206ENST00000592942 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
TRIM47-206ENST00000592942 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
TRIM47-206ENST00000592942 IGKV2-24A0A0C4DH68 120 aa9.68□□□□□ -0.86
TRIM47-206ENST00000592942 TINCRA0A1B0GVN0 87 aa9.68□□□□□ -0.86
TRIM47-206ENST00000592942 SEC11AP67812 179 aa9.68□□□□□ -0.86
TRIM47-206ENST00000592942 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
TRIM47-206ENST00000592942 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
TRIM47-206ENST00000592942 H0Y8G0 127 aa9.67□□□□□ -0.86
TRIM47-206ENST00000592942 IGLC3P0DOY3 106 aa9.67□□□□□ -0.86
TRIM47-206ENST00000592942 MAJINQ3KP22 176 aa9.67□□□□□ -0.86
TRIM47-206ENST00000592942 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
TRIM47-206ENST00000592942 GEMIN7Q9H840 131 aaKnown RBP9.67□□□□□ -0.86
TRIM47-206ENST00000592942 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
TRIM47-206ENST00000592942 C20orf202A1L168 122 aa9.66□□□□□ -0.86
TRIM47-206ENST00000592942 C2orf82Q6UX34 121 aa9.66□□□□□ -0.86
TRIM47-206ENST00000592942 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
TRIM47-206ENST00000592942 NDUFA1O15239 70 aa9.65□□□□□ -0.86
TRIM47-206ENST00000592942 AKR1D1P51857 326 aa9.65□□□□□ -0.86
TRIM47-206ENST00000592942 PTTG1IPP53801 180 aa9.65□□□□□ -0.86
TRIM47-206ENST00000592942 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 DPM2O94777 84 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 STPG4Q8N801 248 aa9.64□□□□□ -0.87
TRIM47-206ENST00000592942 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
TRIM47-206ENST00000592942 LOC105371267A0A1B0GV96 52 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 PLA2G1BP04054 148 aaKnown RBP9.63□□□□□ -0.87
TRIM47-206ENST00000592942 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 PLNP26678 52 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 JOSD1Q15040 202 aaPredicted RBP9.63□□□□□ -0.87
TRIM47-206ENST00000592942 Q8IZM0 81 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
TRIM47-206ENST00000592942 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
TRIM47-206ENST00000592942 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
TRIM47-206ENST00000592942 IGKCP01834 107 aa9.62□□□□□ -0.87
TRIM47-206ENST00000592942 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
TRIM47-206ENST00000592942 PKIGQ9Y2B9 76 aa9.62□□□□□ -0.87
TRIM47-206ENST00000592942 PKHD1L1Q86WI1 4243 aa9.61□□□□□ -0.87
TRIM47-206ENST00000592942 TRBV30A0A0K0K1B3 111 aa9.61□□□□□ -0.87
TRIM47-206ENST00000592942 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
TRIM47-206ENST00000592942 C9orf116Q5BN46 136 aaPredicted RBP9.61□□□□□ -0.87
TRIM47-206ENST00000592942 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
TRIM47-206ENST00000592942 Q6ZRP5 223 aa9.61□□□□□ -0.87
TRIM47-206ENST00000592942 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
TRIM47-206ENST00000592942 SPINK8P0C7L1 97 aa9.6□□□□□ -0.87
TRIM47-206ENST00000592942 PRSS2P07478 247 aa9.59□□□□□ -0.87
TRIM47-206ENST00000592942 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
TRIM47-206ENST00000592942 PYY3Q5JQD4 70 aa9.59□□□□□ -0.87
TRIM47-206ENST00000592942 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
TRIM47-206ENST00000592942 H3BRM9 83 aa9.58□□□□□ -0.88
TRIM47-206ENST00000592942 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
TRIM47-206ENST00000592942 TMEM170BQ5T4T1 132 aa9.58□□□□□ -0.88
TRIM47-206ENST00000592942 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
TRIM47-206ENST00000592942 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
TRIM47-206ENST00000592942 CKS1BP61024 79 aa9.57□□□□□ -0.88
TRIM47-206ENST00000592942 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
TRIM47-206ENST00000592942 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
TRIM47-206ENST00000592942 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
TRIM47-206ENST00000592942 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
TRIM47-206ENST00000592942 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
TRIM47-206ENST00000592942 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
TRIM47-206ENST00000592942 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
TRIM47-206ENST00000592942 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
TRIM47-206ENST00000592942 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
TRIM47-206ENST00000592942 LRP1Q07954 4544 aaKnown RBP9.55□□□□□ -0.88
TRIM47-206ENST00000592942 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
TRIM47-206ENST00000592942 HERVK_113P61574 105 aa9.54□□□□□ -0.88
TRIM47-206ENST00000592942 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
TRIM47-206ENST00000592942 CXCL5P42830 114 aa9.53□□□□□ -0.88
TRIM47-206ENST00000592942 E9PLD3 99 aa9.52□□□□□ -0.89
TRIM47-206ENST00000592942 HSBP1L1C9JCN9 74 aa9.51□□□□□ -0.89
TRIM47-206ENST00000592942 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
TRIM47-206ENST00000592942 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
TRIM47-206ENST00000592942 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
TRIM47-206ENST00000592942 LEPROTO15243 131 aa9.5□□□□□ -0.89
TRIM47-206ENST00000592942 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
TRIM47-206ENST00000592942 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
TRIM47-206ENST00000592942 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
TRIM47-206ENST00000592942 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
TRIM47-206ENST00000592942 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
TRIM47-206ENST00000592942 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
TRIM47-206ENST00000592942 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms