RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 SCO1O75880 301 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 KIAA0087Q14695 138 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 Q8IZM0 81 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 CHCHD1Q96BP2 118 aaKnown RBP6.36□□□□□ -1.39
BRCA1-227ENST00000591849 URB1-AS1Q96HZ7 61 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 C6orf48Q9UBA6 75 aa6.36□□□□□ -1.39
BRCA1-227ENST00000591849 J3QL48 77 aa6.35□□□□□ -1.39
BRCA1-227ENST00000591849 HSBP1O75506 76 aa6.35□□□□□ -1.39
BRCA1-227ENST00000591849 TRGC2P03986 189 aa6.35□□□□□ -1.39
BRCA1-227ENST00000591849 C9orf116Q5BN46 136 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-227ENST00000591849 PDZD11Q5EBL8 140 aa6.35□□□□□ -1.39
BRCA1-227ENST00000591849 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
BRCA1-227ENST00000591849 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
BRCA1-227ENST00000591849 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
BRCA1-227ENST00000591849 A0A096LNJ9 63 aa6.33□□□□□ -1.4
BRCA1-227ENST00000591849 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
BRCA1-227ENST00000591849 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
BRCA1-227ENST00000591849 CXCL5P42830 114 aa6.33□□□□□ -1.4
BRCA1-227ENST00000591849 Q6ZRP5 223 aa6.33□□□□□ -1.4
BRCA1-227ENST00000591849 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
BRCA1-227ENST00000591849 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 NDUFC2-KCTD14E9PQ53 114 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 F8VRH5 84 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-227ENST00000591849 IFI27L1Q96BM0 104 aa6.32□□□□□ -1.4
BRCA1-227ENST00000591849 COLCA2A8K830 154 aa6.31□□□□□ -1.4
BRCA1-227ENST00000591849 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-227ENST00000591849 FAM19A2Q8N3H0 131 aa6.31□□□□□ -1.4
BRCA1-227ENST00000591849 H0Y8G0 127 aa6.3□□□□□ -1.4
BRCA1-227ENST00000591849 PRR3P79522 188 aaKnown RBP6.3□□□□□ -1.4
BRCA1-227ENST00000591849 PHF5AQ7RTV0 110 aaKnown RBP6.3□□□□□ -1.4
BRCA1-227ENST00000591849 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
BRCA1-227ENST00000591849 SERF1AO75920 110 aa6.29□□□□□ -1.4
BRCA1-227ENST00000591849 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
BRCA1-227ENST00000591849 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-227ENST00000591849 UBE2BP63146 152 aa6.29□□□□□ -1.4
BRCA1-227ENST00000591849 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 C11orf86A6NJI1 115 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-227ENST00000591849 OXTP01178 125 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 FABP4P15090 132 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 HNRNPA3P51991 378 aaKnown RBP6.28□□□□□ -1.4
BRCA1-227ENST00000591849 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
BRCA1-227ENST00000591849 M0QXV9 152 aa6.27□□□□□ -1.41
BRCA1-227ENST00000591849 PFN2P35080 140 aa6.27□□□□□ -1.41
BRCA1-227ENST00000591849 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
BRCA1-227ENST00000591849 LBHQ53QV2 105 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-227ENST00000591849 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
BRCA1-227ENST00000591849 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
BRCA1-227ENST00000591849 SERTAD4-AS1Q5TG53 156 aa6.26□□□□□ -1.41
BRCA1-227ENST00000591849 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
BRCA1-227ENST00000591849 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-227ENST00000591849 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
BRCA1-227ENST00000591849 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
BRCA1-227ENST00000591849 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
BRCA1-227ENST00000591849 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
BRCA1-227ENST00000591849 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
BRCA1-227ENST00000591849 NUPR1O60356 82 aa6.23□□□□□ -1.41
BRCA1-227ENST00000591849 NKAPP1Q8N9T2 125 aa6.23□□□□□ -1.41
BRCA1-227ENST00000591849 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
BRCA1-227ENST00000591849 ERG28Q9UKR5 140 aa6.23□□□□□ -1.41
BRCA1-227ENST00000591849 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
BRCA1-227ENST00000591849 S100A6P06703 90 aa6.22□□□□□ -1.41
BRCA1-227ENST00000591849 LINC00158P58513 81 aa6.22□□□□□ -1.41
BRCA1-227ENST00000591849 LINC00310P59036 64 aa6.22□□□□□ -1.41
BRCA1-227ENST00000591849 HERVK_113P61574 105 aa6.22□□□□□ -1.41
BRCA1-227ENST00000591849 ODF1Q14990 250 aa6.22□□□□□ -1.41
BRCA1-227ENST00000591849 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BKO60814 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 DPM2O94777 84 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BJP06899 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BOP23527 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 PLNP26678 52 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BBP33778 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BDP58876 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BCP62807 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 COX17Q14061 63 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST2H2BEQ16778 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-227ENST00000591849 MRPL55Q7Z7F7 128 aaKnown RBP6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BHQ93079 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BNQ99877 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 HIST1H2BMQ99879 126 aa6.21□□□□□ -1.42
BRCA1-227ENST00000591849 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 IGKCP01834 107 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 RPL24P83731 157 aaKnown RBP6.2□□□□□ -1.42
BRCA1-227ENST00000591849 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
BRCA1-227ENST00000591849 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 PMCHL2Q9BQD1 86 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 TP73-AS1Q9UF72 201 aa6.2□□□□□ -1.42
BRCA1-227ENST00000591849 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms