RNA–Protein interactions for RNA: ENST00000590930.5

CHUK-204, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 1 (best)

Gene CHUK, Length 4,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-204ENST00000590930 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
CHUK-204ENST00000590930 TMEM254Q8TBM7 123 aa2.82□□□□□ -1.96
CHUK-204ENST00000590930 CR1P17927 2039 aa2.82□□□□□ -1.96
CHUK-204ENST00000590930 HOXD3P31249 432 aaPredicted RBP2.81□□□□□ -1.96
CHUK-204ENST00000590930 FXYD7P58549 80 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 LCE2DQ5TA82 110 aaPredicted RBP2.81□□□□□ -1.96
CHUK-204ENST00000590930 TLN2Q9Y4G6 2542 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 TMSB15BA0A087X1C1 80 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 IGHV3-38A0A0C4DH36 116 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 C11orf45Q8TAV5 145 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 B9D2Q9BPU9 175 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 GNRH2O43555 120 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 MRPL55Q7Z7F7 128 aaKnown RBP2.81□□□□□ -1.96
CHUK-204ENST00000590930 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 TRAV10A0A0B4J240 114 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 HCG22E2RYF7 251 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 MGPP08493 103 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 SPRR1AP35321 89 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 RBM3P98179 157 aaKnown RBP2.81□□□□□ -1.96
CHUK-204ENST00000590930 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
CHUK-204ENST00000590930 MALRD1Q5VYJ5 2156 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 USP24Q9UPU5 2620 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 NREPQ16612 68 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 CSNK1G2-AS1Q8NCQ2 148 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 PRR34Q9NV39 138 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 AKAP9Q99996 3911 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 MUC4Q99102 2169 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 RPL36AP83881 106 aaKnown RBP2.8□□□□□ -1.96
CHUK-204ENST00000590930 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 RPL36ALQ969Q0 106 aaKnown RBP2.8□□□□□ -1.96
CHUK-204ENST00000590930 AGRNO00468 2067 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 NOTCH3Q9UM47 2321 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 TRGV4A0A0C4DH28 118 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 COX6A2Q02221 97 aa2.8□□□□□ -1.96
CHUK-204ENST00000590930 A6NN06 94 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 OXLD1Q5BKU9 147 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 DGAT2L7PQ6IED9 249 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 ANKRD17O75179 2603 aaKnown RBP2.79□□□□□ -1.96
CHUK-204ENST00000590930 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 H3BTX0 84 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 IGKV3-20P01619 116 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 APELAP0DMC3 54 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 UBE2AP49459 152 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 KPRPQ5T749 579 aaPredicted RBP2.79□□□□□ -1.96
CHUK-204ENST00000590930 SPRR1BP22528 89 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 PROK1P58294 105 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
CHUK-204ENST00000590930 H0Y9J4 135 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 C9orf163Q8N9P6 203 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 IGHV3-48P01763 117 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 PRB3Q04118 309 aaPredicted RBP2.78□□□□□ -1.96
CHUK-204ENST00000590930 C14orf177Q52M58 125 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 DEFB131AP59861 70 aa2.78□□□□□ -1.96
CHUK-204ENST00000590930 MED12Q93074 2177 aa2.78□□□□□ -1.97
CHUK-204ENST00000590930 F5H697 171 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 UNQ9165/PRO28630Q6UXU0 137 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 LINC00528Q8N1L1 170 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 ALMS1Q8TCU4 4167 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 J3QL48 77 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 BPY2O14599 106 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHUK-204ENST00000590930 ZNF702PQ9H963 129 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
CHUK-204ENST00000590930 USP9YO00507 2555 aaPredicted RBP2.77□□□□□ -1.97
CHUK-204ENST00000590930 KRTAP29-1A8MX34 341 aaPredicted RBP2.77□□□□□ -1.97
CHUK-204ENST00000590930 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
CHUK-204ENST00000590930 A0A1W2PPR1 153 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 F8WEM9 126 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 SLURP1P55000 103 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 C22orf34Q6ZV56 151 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 TIMM8BQ9Y5J9 83 aaPredicted RBP2.76□□□□□ -1.97
CHUK-204ENST00000590930 LINC00959A0A1B0GUT2 108 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 DEFB136Q30KP8 78 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 DHRS4-AS1Q9P1J3 65 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 PRB2P02812 416 aaPredicted RBP2.76□□□□□ -1.97
CHUK-204ENST00000590930 Q6ZRP5 223 aa2.76□□□□□ -1.97
CHUK-204ENST00000590930 G3V318 75 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 C9orf129Q5T035 196 aaKnown RBP2.75□□□□□ -1.97
CHUK-204ENST00000590930 Q6ZR54 194 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 LECT2O14960 151 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DEFB130BP0DP73 79 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DEFB130AP0DP74 79 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DEFB135Q30KP9 77 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DEFB131BA0A096LNP1 70 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DIRC1Q969H9 104 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 MAP6D1Q9H9H5 199 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DNAH1Q9P2D7 4330 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 IGLV7-46A0A075B6I9 117 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 M0R378 163 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 ENHOQ6UWT2 76 aa2.75□□□□□ -1.97
CHUK-204ENST00000590930 DNAH6Q9C0G6 4158 aa2.74□□□□□ -1.97
CHUK-204ENST00000590930 IGHV3-49A0A0A0MS15 119 aa2.74□□□□□ -1.97
CHUK-204ENST00000590930 EGFEM1PQ0D2K5 195 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms