RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
VAT1-208ENST00000590924 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
VAT1-208ENST00000590924 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
VAT1-208ENST00000590924 F8VRH5 84 aa11.49□□□□□ -0.57
VAT1-208ENST00000590924 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
VAT1-208ENST00000590924 RPL37AP61513 92 aaKnown RBP11.48□□□□□ -0.57
VAT1-208ENST00000590924 S100A6P06703 90 aa11.47□□□□□ -0.57
VAT1-208ENST00000590924 ZNF22P17026 224 aaPredicted RBP11.47□□□□□ -0.57
VAT1-208ENST00000590924 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
VAT1-208ENST00000590924 KIAA0087Q14695 138 aa11.47□□□□□ -0.57
VAT1-208ENST00000590924 ODF1Q14990 250 aa11.47□□□□□ -0.57
VAT1-208ENST00000590924 MRPL35Q9NZE8 188 aaKnown RBP11.47□□□□□ -0.57
VAT1-208ENST00000590924 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
VAT1-208ENST00000590924 C11orf86A6NJI1 115 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 SMIM1B2RUZ4 78 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 SDIM1Q6ZPB5 146 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 Q8IZM0 81 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
VAT1-208ENST00000590924 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
VAT1-208ENST00000590924 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
VAT1-208ENST00000590924 CARD19Q96LW7 228 aa11.45□□□□□ -0.58
VAT1-208ENST00000590924 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
VAT1-208ENST00000590924 SYS1-DBNDD2H3BUS1 97 aa11.44□□□□□ -0.58
VAT1-208ENST00000590924 PANO1I0J062 215 aa11.44□□□□□ -0.58
VAT1-208ENST00000590924 PRSS2P07478 247 aa11.44□□□□□ -0.58
VAT1-208ENST00000590924 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
VAT1-208ENST00000590924 H0Y8G0 127 aa11.43□□□□□ -0.58
VAT1-208ENST00000590924 NDUFA1O15239 70 aa11.43□□□□□ -0.58
VAT1-208ENST00000590924 PLNP26678 52 aa11.43□□□□□ -0.58
VAT1-208ENST00000590924 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
VAT1-208ENST00000590924 TMEM170BQ5T4T1 132 aa11.43□□□□□ -0.58
VAT1-208ENST00000590924 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
VAT1-208ENST00000590924 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
VAT1-208ENST00000590924 HNRNPA3P51991 378 aaKnown RBP11.42□□□□□ -0.58
VAT1-208ENST00000590924 Q6ZRU5 148 aa11.42□□□□□ -0.58
VAT1-208ENST00000590924 HIST3H2BBQ8N257 126 aa11.42□□□□□ -0.58
VAT1-208ENST00000590924 DPM2O94777 84 aa11.41□□□□□ -0.58
VAT1-208ENST00000590924 SPINK8P0C7L1 97 aa11.41□□□□□ -0.58
VAT1-208ENST00000590924 CXCL5P42830 114 aa11.41□□□□□ -0.58
VAT1-208ENST00000590924 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
VAT1-208ENST00000590924 C3orf79P0CE67 100 aa11.4□□□□□ -0.58
VAT1-208ENST00000590924 S100A2P29034 98 aa11.4□□□□□ -0.58
VAT1-208ENST00000590924 CKS1BP61024 79 aa11.4□□□□□ -0.58
VAT1-208ENST00000590924 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
VAT1-208ENST00000590924 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 C5orf52A6NGY3 159 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 IGKCP01834 107 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 UNQ6190/PRO20217Q6UXQ8 127 aa11.39□□□□□ -0.59
VAT1-208ENST00000590924 SNRPEP62304 92 aaKnown RBP11.38□□□□□ -0.59
VAT1-208ENST00000590924 HIST1H2BLQ99880 126 aa11.37□□□□□ -0.59
VAT1-208ENST00000590924 LOC107984640A0A0U1RRK4 108 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 AKR1D1P51857 326 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 KRTDAPP60985 99 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 C2orf82Q6UX34 121 aa11.36□□□□□ -0.59
VAT1-208ENST00000590924 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
VAT1-208ENST00000590924 SPACA4Q8TDM5 124 aa11.35□□□□□ -0.59
VAT1-208ENST00000590924 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
VAT1-208ENST00000590924 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
VAT1-208ENST00000590924 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
VAT1-208ENST00000590924 HMCN2Q8NDA2 5059 aa11.34□□□□□ -0.59
VAT1-208ENST00000590924 A0A087WYN8 130 aa11.34□□□□□ -0.59
VAT1-208ENST00000590924 C20orf202A1L168 122 aa11.34□□□□□ -0.59
VAT1-208ENST00000590924 CHTF8P0CG12 524 aa11.34□□□□□ -0.59
VAT1-208ENST00000590924 HERVK_113P61574 105 aa11.33□□□□□ -0.6
VAT1-208ENST00000590924 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
VAT1-208ENST00000590924 PLA2G2DQ9UNK4 145 aa11.32□□□□□ -0.6
VAT1-208ENST00000590924 DPH3Q96FX2 82 aa11.31□□□□□ -0.6
VAT1-208ENST00000590924 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
VAT1-208ENST00000590924 LEPROTO15243 131 aa11.3□□□□□ -0.6
VAT1-208ENST00000590924 MT1HL1P0DM35 61 aa11.3□□□□□ -0.6
VAT1-208ENST00000590924 PTTG1IPP53801 180 aa11.3□□□□□ -0.6
VAT1-208ENST00000590924 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
VAT1-208ENST00000590924 A0A096LNI7 61 aa11.29□□□□□ -0.6
VAT1-208ENST00000590924 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
VAT1-208ENST00000590924 E9PLD3 99 aa11.27□□□□□ -0.61
VAT1-208ENST00000590924 GAGE2BQ13066 116 aa11.27□□□□□ -0.61
VAT1-208ENST00000590924 C9orf116Q5BN46 136 aaPredicted RBP11.27□□□□□ -0.61
VAT1-208ENST00000590924 IGKV2-24A0A0C4DH68 120 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 HERV-K104P63124 156 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 RPL18AQ02543 176 aaKnown RBP11.26□□□□□ -0.61
VAT1-208ENST00000590924 COX17Q14061 63 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 MAJINQ3KP22 176 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 Q6ZRP5 223 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
VAT1-208ENST00000590924 J3QQQ9 107 aa11.25□□□□□ -0.61
VAT1-208ENST00000590924 NMUP48645 174 aa11.25□□□□□ -0.61
VAT1-208ENST00000590924 MYMXA0A1B0GTQ4 84 aa11.24□□□□□ -0.61
VAT1-208ENST00000590924 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
VAT1-208ENST00000590924 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
VAT1-208ENST00000590924 STPG4Q8N801 248 aa11.23□□□□□ -0.61
VAT1-208ENST00000590924 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
VAT1-208ENST00000590924 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
VAT1-208ENST00000590924 TSPEAR-AS2P59090 65 aa11.21□□□□□ -0.61
VAT1-208ENST00000590924 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
VAT1-208ENST00000590924 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms