RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
GCDH-210ENST00000590445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
GCDH-210ENST00000590445 LINC00474Q9P2X8 69 aa10.26□□□□□ -0.77
GCDH-210ENST00000590445 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
GCDH-210ENST00000590445 LOC107984640A0A0U1RRK4 108 aa10.25□□□□□ -0.77
GCDH-210ENST00000590445 NUPR1O60356 82 aa10.25□□□□□ -0.77
GCDH-210ENST00000590445 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
GCDH-210ENST00000590445 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
GCDH-210ENST00000590445 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
GCDH-210ENST00000590445 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
GCDH-210ENST00000590445 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
GCDH-210ENST00000590445 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 F8VRH5 84 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 PANO1I0J062 215 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 ZNF22P17026 224 aaPredicted RBP10.23□□□□□ -0.77
GCDH-210ENST00000590445 CXCL5P42830 114 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 CKS1BP61024 79 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
GCDH-210ENST00000590445 FABP4P15090 132 aa10.22□□□□□ -0.77
GCDH-210ENST00000590445 COA6Q5JTJ3 125 aaKnown RBP10.22□□□□□ -0.77
GCDH-210ENST00000590445 A0A096LNI7 61 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 SPINK8P0C7L1 97 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 C10orf25Q5T742 122 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 C6orf48Q9UBA6 75 aa10.21□□□□□ -0.77
GCDH-210ENST00000590445 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
GCDH-210ENST00000590445 TLX1NBP0CAT3 122 aa10.2□□□□□ -0.78
GCDH-210ENST00000590445 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
GCDH-210ENST00000590445 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
GCDH-210ENST00000590445 C2orf82Q6UX34 121 aa10.2□□□□□ -0.78
GCDH-210ENST00000590445 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 H0Y8G0 127 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
GCDH-210ENST00000590445 ODF1Q14990 250 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 MAP1LC3CQ9BXW4 147 aa10.19□□□□□ -0.78
GCDH-210ENST00000590445 DMBT1Q9UGM3 2413 aaPredicted RBP10.19□□□□□ -0.78
GCDH-210ENST00000590445 A0A087WYN8 130 aa10.18□□□□□ -0.78
GCDH-210ENST00000590445 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
GCDH-210ENST00000590445 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
GCDH-210ENST00000590445 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
GCDH-210ENST00000590445 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
GCDH-210ENST00000590445 PLNP26678 52 aa10.16□□□□□ -0.78
GCDH-210ENST00000590445 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
GCDH-210ENST00000590445 STPG4Q8N801 248 aa10.16□□□□□ -0.78
GCDH-210ENST00000590445 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
GCDH-210ENST00000590445 NDUFC2-KCTD14E9PQ53 114 aa10.15□□□□□ -0.78
GCDH-210ENST00000590445 Q6ZRP5 223 aa10.14□□□□□ -0.79
GCDH-210ENST00000590445 DPM2O94777 84 aa10.13□□□□□ -0.79
GCDH-210ENST00000590445 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
GCDH-210ENST00000590445 SYS1-DBNDD2H3BUS1 97 aa10.12□□□□□ -0.79
GCDH-210ENST00000590445 J3QL48 77 aa10.12□□□□□ -0.79
GCDH-210ENST00000590445 IGKCP01834 107 aa10.12□□□□□ -0.79
GCDH-210ENST00000590445 C9orf116Q5BN46 136 aaPredicted RBP10.12□□□□□ -0.79
GCDH-210ENST00000590445 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
GCDH-210ENST00000590445 HERC1Q15751 4861 aa10.11□□□□□ -0.79
GCDH-210ENST00000590445 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
GCDH-210ENST00000590445 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
GCDH-210ENST00000590445 PET117Q6UWS5 81 aa10.1□□□□□ -0.79
GCDH-210ENST00000590445 S100A6P06703 90 aa10.09□□□□□ -0.79
GCDH-210ENST00000590445 HERVK_113P61574 105 aa10.09□□□□□ -0.79
GCDH-210ENST00000590445 PMCHL2Q9BQD1 86 aa10.08□□□□□ -0.8
GCDH-210ENST00000590445 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
GCDH-210ENST00000590445 OXTP01178 125 aa10.07□□□□□ -0.8
GCDH-210ENST00000590445 COX17Q14061 63 aa10.07□□□□□ -0.8
GCDH-210ENST00000590445 LINC01545Q5VT33 79 aa10.07□□□□□ -0.8
GCDH-210ENST00000590445 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
GCDH-210ENST00000590445 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
GCDH-210ENST00000590445 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
GCDH-210ENST00000590445 C20orf202A1L168 122 aa10.05□□□□□ -0.8
GCDH-210ENST00000590445 LEPROTO15243 131 aa10.05□□□□□ -0.8
GCDH-210ENST00000590445 S100A2P29034 98 aa10.05□□□□□ -0.8
GCDH-210ENST00000590445 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
GCDH-210ENST00000590445 KRTDAPP60985 99 aa10.05□□□□□ -0.8
GCDH-210ENST00000590445 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
GCDH-210ENST00000590445 AKR1D1P51857 326 aa10.04□□□□□ -0.8
GCDH-210ENST00000590445 HERV-K104P63124 156 aa10.04□□□□□ -0.8
GCDH-210ENST00000590445 C9orf129Q5T035 196 aaKnown RBP10.04□□□□□ -0.8
GCDH-210ENST00000590445 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
GCDH-210ENST00000590445 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
GCDH-210ENST00000590445 PFN2P35080 140 aa10.03□□□□□ -0.8
GCDH-210ENST00000590445 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
GCDH-210ENST00000590445 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
GCDH-210ENST00000590445 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
GCDH-210ENST00000590445 XAGE1AQ9HD64 81 aa10.02□□□□□ -0.81
GCDH-210ENST00000590445 NDUFA12Q9UI09 145 aa10.02□□□□□ -0.81
GCDH-210ENST00000590445 J3QQQ9 107 aa10.01□□□□□ -0.81
GCDH-210ENST00000590445 NMUP48645 174 aa10.01□□□□□ -0.81
GCDH-210ENST00000590445 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
GCDH-210ENST00000590445 E9PLD3 99 aa10□□□□□ -0.81
GCDH-210ENST00000590445 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
GCDH-210ENST00000590445 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
GCDH-210ENST00000590445 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
GCDH-210ENST00000590445 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
GCDH-210ENST00000590445 M0QXV9 152 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms