RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 NDUFA1O15239 70 aa9.93□□□□□ -0.82
DDX39A-211ENST00000590239 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-211ENST00000590239 C12orf57Q99622 126 aa9.93□□□□□ -0.82
DDX39A-211ENST00000590239 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
DDX39A-211ENST00000590239 MYMXA0A1B0GTQ4 84 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 EREGO14944 169 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 TNP2Q05952 138 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 Q8N814 137 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
DDX39A-211ENST00000590239 COX8AP10176 69 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 HERV-K104P63124 156 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 LINC00336Q6ZUF6 198 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 PCP2Q8IVA1 136 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
DDX39A-211ENST00000590239 ZNF815PA8K554 130 aa9.9□□□□□ -0.82
DDX39A-211ENST00000590239 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
DDX39A-211ENST00000590239 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
DDX39A-211ENST00000590239 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.82
DDX39A-211ENST00000590239 DNAH2Q9P225 4427 aa9.89□□□□□ -0.83
DDX39A-211ENST00000590239 DLEU1O43261 78 aa9.89□□□□□ -0.83
DDX39A-211ENST00000590239 TTTY13Q9BZ97 58 aa9.89□□□□□ -0.83
DDX39A-211ENST00000590239 TRBV30A0A0K0K1B3 111 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 SLPIP03973 132 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 Q6ZRU5 148 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 BOD1L2Q8IYS8 172 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 C14orf144Q96I85 54 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 CARD19Q96LW7 228 aa9.88□□□□□ -0.83
DDX39A-211ENST00000590239 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-211ENST00000590239 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
DDX39A-211ENST00000590239 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
DDX39A-211ENST00000590239 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
DDX39A-211ENST00000590239 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
DDX39A-211ENST00000590239 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
DDX39A-211ENST00000590239 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
DDX39A-211ENST00000590239 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
DDX39A-211ENST00000590239 COX17Q14061 63 aa9.84□□□□□ -0.83
DDX39A-211ENST00000590239 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
DDX39A-211ENST00000590239 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
DDX39A-211ENST00000590239 TIMM17BO60830 172 aa9.83□□□□□ -0.84
DDX39A-211ENST00000590239 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
DDX39A-211ENST00000590239 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
DDX39A-211ENST00000590239 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
DDX39A-211ENST00000590239 MEIG1Q5JSS6 88 aa9.82□□□□□ -0.84
DDX39A-211ENST00000590239 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
DDX39A-211ENST00000590239 PGPEP1Q9NXJ5 209 aa9.82□□□□□ -0.84
DDX39A-211ENST00000590239 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
DDX39A-211ENST00000590239 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
DDX39A-211ENST00000590239 PRO1933Q9H354 126 aa9.81□□□□□ -0.84
DDX39A-211ENST00000590239 PKIGQ9Y2B9 76 aa9.81□□□□□ -0.84
DDX39A-211ENST00000590239 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 TSTD3H0UI37 97 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 PFN2P35080 140 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 LINC00158P58513 81 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
DDX39A-211ENST00000590239 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
DDX39A-211ENST00000590239 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
DDX39A-211ENST00000590239 LITAFQ99732 161 aa9.79□□□□□ -0.84
DDX39A-211ENST00000590239 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
DDX39A-211ENST00000590239 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
DDX39A-211ENST00000590239 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
DDX39A-211ENST00000590239 Q6ZVH6 145 aa9.77□□□□□ -0.85
DDX39A-211ENST00000590239 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
DDX39A-211ENST00000590239 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 SPANXCQ9NY87 97 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
DDX39A-211ENST00000590239 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
DDX39A-211ENST00000590239 FUSP35637 526 aaKnown RBP eCLIP9.75□□□□□ -0.85
DDX39A-211ENST00000590239 Q6ZRP5 223 aa9.75□□□□□ -0.85
DDX39A-211ENST00000590239 GCSHP23434 173 aa9.74□□□□□ -0.85
DDX39A-211ENST00000590239 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
DDX39A-211ENST00000590239 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
DDX39A-211ENST00000590239 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
DDX39A-211ENST00000590239 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 IFITM1P13164 125 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.85
DDX39A-211ENST00000590239 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 DAND5Q8N907 189 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
DDX39A-211ENST00000590239 LOC107984156A0A0G2JMH3 177 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 TAL2Q16559 108 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 ARL17AQ8IVW1 177 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 HIST1H4GQ99525 98 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
DDX39A-211ENST00000590239 HECTD4Q9Y4D8 3996 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms