RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 C3orf79P0CE67 100 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 KRTDAPP60985 99 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 PMVKQ15126 192 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 Q5VSD8 79 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 TEX43Q6ZNM6 134 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 OR10D4PQ8NGN7 298 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 VCX2Q9H322 139 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
SDF2-208ENST00000589788 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 C2orf88Q9BSF0 95 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 CHAC1Q9BUX1 264 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 CST9LQ9H4G1 147 aa6.69□□□□□ -1.34
SDF2-208ENST00000589788 LOC105371267A0A1B0GV96 52 aa6.68□□□□□ -1.34
SDF2-208ENST00000589788 COX7A2LO14548 114 aa6.68□□□□□ -1.34
SDF2-208ENST00000589788 KRTAP9-3Q9BYQ3 159 aa6.68□□□□□ -1.34
SDF2-208ENST00000589788 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 H0Y8G0 127 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 SLPIP03973 132 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 LINC01545Q5VT33 79 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
SDF2-208ENST00000589788 C20orf202A1L168 122 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 F8VRH5 84 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 UBE2D1P51668 147 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 FAM19A3Q7Z5A8 133 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
SDF2-208ENST00000589788 CHTOPQ9Y3Y2 248 aaKnown RBP6.66□□□□□ -1.34
SDF2-208ENST00000589788 RYR1P21817 5038 aa6.65□□□□□ -1.34
SDF2-208ENST00000589788 A0A0A0MQY5 61 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 APOMO95445 188 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 IGLC3P0DOY3 106 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 AKR1D1P51857 326 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 C5orf38Q86SI9 138 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.35
SDF2-208ENST00000589788 HSPG2P98160 4391 aa6.65□□□□□ -1.35
SDF2-208ENST00000589788 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 PLNP26678 52 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 SEC11AP67812 179 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
SDF2-208ENST00000589788 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
SDF2-208ENST00000589788 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 DPM2O94777 84 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 SCGB1D1O95968 90 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 HERVK_113P63121 156 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 COX6A2Q02221 97 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 LINC00242Q5T6M2 205 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 PMCHL2Q9BQD1 86 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
SDF2-208ENST00000589788 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 PANO1I0J062 215 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 IGKCP01834 107 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 CHTF8P0CG12 524 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 CAMK2N2Q96S95 79 aa6.62□□□□□ -1.35
SDF2-208ENST00000589788 GEMIN7Q9H840 131 aaKnown RBP6.62□□□□□ -1.35
SDF2-208ENST00000589788 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
SDF2-208ENST00000589788 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
SDF2-208ENST00000589788 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
SDF2-208ENST00000589788 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
SDF2-208ENST00000589788 ORAOV1Q8WV07 137 aa6.61□□□□□ -1.35
SDF2-208ENST00000589788 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
SDF2-208ENST00000589788 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
SDF2-208ENST00000589788 MAJINQ3KP22 176 aa6.6□□□□□ -1.35
SDF2-208ENST00000589788 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
SDF2-208ENST00000589788 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
SDF2-208ENST00000589788 A0A087WYN8 130 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 A0A087WZ39 114 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 SMIM6P0DI80 62 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 Q6ZRU5 148 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 ATOH7Q8N100 152 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 LINC00469Q8N7U9 141 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 LINC00474Q9P2X8 69 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
SDF2-208ENST00000589788 A0A096LNI7 61 aa6.58□□□□□ -1.36
SDF2-208ENST00000589788 LOC107984640A0A0U1RRK4 108 aa6.58□□□□□ -1.36
SDF2-208ENST00000589788 F8WDY8 70 aa6.58□□□□□ -1.36
SDF2-208ENST00000589788 H3BRM9 83 aa6.58□□□□□ -1.36
SDF2-208ENST00000589788 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
SDF2-208ENST00000589788 NDUFA1O15239 70 aa6.57□□□□□ -1.36
SDF2-208ENST00000589788 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
SDF2-208ENST00000589788 LINC01561Q8N1V8 128 aa6.57□□□□□ -1.36
SDF2-208ENST00000589788 STPG4Q8N801 248 aa6.57□□□□□ -1.36
SDF2-208ENST00000589788 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
SDF2-208ENST00000589788 HERVK_113P61574 105 aa6.56□□□□□ -1.36
SDF2-208ENST00000589788 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
SDF2-208ENST00000589788 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
SDF2-208ENST00000589788 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
SDF2-208ENST00000589788 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms