RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 URB1-AS1Q96HZ7 61 aa10.6□□□□□ -0.71
H3F3B-208ENST00000589599 HERC1Q15751 4861 aa10.6□□□□□ -0.71
H3F3B-208ENST00000589599 C9orf116Q5BN46 136 aaPredicted RBP10.59□□□□□ -0.71
H3F3B-208ENST00000589599 A0A1W2PNN7 141 aa10.58□□□□□ -0.72
H3F3B-208ENST00000589599 Q6ZRP5 223 aa10.58□□□□□ -0.72
H3F3B-208ENST00000589599 PKHD1L1Q86WI1 4243 aa10.58□□□□□ -0.72
H3F3B-208ENST00000589599 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 A0A096LNJ9 63 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 NDUFC2-KCTD14E9PQ53 114 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 ATP5LO75964 103 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 OXTP01178 125 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 HNRNPA3P51991 378 aaKnown RBP10.57□□□□□ -0.72
H3F3B-208ENST00000589599 PMCHL1Q16048 86 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 PDZD11Q5EBL8 140 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
H3F3B-208ENST00000589599 H3BRM9 83 aa10.56□□□□□ -0.72
H3F3B-208ENST00000589599 PRR3P79522 188 aaKnown RBP10.56□□□□□ -0.72
H3F3B-208ENST00000589599 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
H3F3B-208ENST00000589599 SMIM1B2RUZ4 78 aa10.55□□□□□ -0.72
H3F3B-208ENST00000589599 F8VRH5 84 aa10.55□□□□□ -0.72
H3F3B-208ENST00000589599 CXCL5P42830 114 aa10.55□□□□□ -0.72
H3F3B-208ENST00000589599 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
H3F3B-208ENST00000589599 IGLC3P0DOY3 106 aa10.53□□□□□ -0.72
H3F3B-208ENST00000589599 BAGE3Q86Y29 109 aa10.53□□□□□ -0.72
H3F3B-208ENST00000589599 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
H3F3B-208ENST00000589599 TRGC2P03986 189 aa10.51□□□□□ -0.73
H3F3B-208ENST00000589599 PHF5AQ7RTV0 110 aaKnown RBP10.51□□□□□ -0.73
H3F3B-208ENST00000589599 FAT3Q8TDW7 4589 aa10.51□□□□□ -0.73
H3F3B-208ENST00000589599 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
H3F3B-208ENST00000589599 FAM168BA1KXE4 195 aa10.5□□□□□ -0.73
H3F3B-208ENST00000589599 HSBP1O75506 76 aa10.5□□□□□ -0.73
H3F3B-208ENST00000589599 FAM19A5Q7Z5A7 132 aaPredicted RBP10.5□□□□□ -0.73
H3F3B-208ENST00000589599 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
H3F3B-208ENST00000589599 C9orf129Q5T035 196 aaKnown RBP10.47□□□□□ -0.73
H3F3B-208ENST00000589599 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
H3F3B-208ENST00000589599 IFI27L1Q96BM0 104 aa10.47□□□□□ -0.73
H3F3B-208ENST00000589599 PSORS1C2Q9UIG4 136 aa10.47□□□□□ -0.73
H3F3B-208ENST00000589599 CHTOPQ9Y3Y2 248 aaKnown RBP10.47□□□□□ -0.73
H3F3B-208ENST00000589599 COLCA2A8K830 154 aa10.46□□□□□ -0.73
H3F3B-208ENST00000589599 M0QXV9 152 aa10.46□□□□□ -0.73
H3F3B-208ENST00000589599 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.73
H3F3B-208ENST00000589599 TRAV12-1A0A0B4J245 112 aa10.45□□□□□ -0.74
H3F3B-208ENST00000589599 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
H3F3B-208ENST00000589599 C11orf86A6NJI1 115 aa10.45□□□□□ -0.74
H3F3B-208ENST00000589599 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
H3F3B-208ENST00000589599 UBE2BP63146 152 aa10.44□□□□□ -0.74
H3F3B-208ENST00000589599 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
H3F3B-208ENST00000589599 FAM19A2Q8N3H0 131 aa10.44□□□□□ -0.74
H3F3B-208ENST00000589599 SRSF9Q13242 221 aaKnown RBP eCLIP10.43□□□□□ -0.74
H3F3B-208ENST00000589599 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
H3F3B-208ENST00000589599 SERF1AO75920 110 aa10.42□□□□□ -0.74
H3F3B-208ENST00000589599 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
H3F3B-208ENST00000589599 REG3GQ6UW15 175 aa10.42□□□□□ -0.74
H3F3B-208ENST00000589599 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
H3F3B-208ENST00000589599 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
H3F3B-208ENST00000589599 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
H3F3B-208ENST00000589599 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
H3F3B-208ENST00000589599 ODF1Q14990 250 aa10.39□□□□□ -0.75
H3F3B-208ENST00000589599 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
H3F3B-208ENST00000589599 IGLV7-43P04211 117 aa10.38□□□□□ -0.75
H3F3B-208ENST00000589599 PFN2P35080 140 aa10.38□□□□□ -0.75
H3F3B-208ENST00000589599 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
H3F3B-208ENST00000589599 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 H0Y8G0 127 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 LINC00310P59036 64 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
H3F3B-208ENST00000589599 SCO1O75880 301 aa10.36□□□□□ -0.75
H3F3B-208ENST00000589599 COX17Q14061 63 aa10.36□□□□□ -0.75
H3F3B-208ENST00000589599 DIRC1Q969H9 104 aa10.36□□□□□ -0.75
H3F3B-208ENST00000589599 PLA2G2DQ9UNK4 145 aa10.36□□□□□ -0.75
H3F3B-208ENST00000589599 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
H3F3B-208ENST00000589599 FABP4P15090 132 aa10.35□□□□□ -0.75
H3F3B-208ENST00000589599 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
H3F3B-208ENST00000589599 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
H3F3B-208ENST00000589599 NUPR1O60356 82 aa10.34□□□□□ -0.75
H3F3B-208ENST00000589599 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
H3F3B-208ENST00000589599 PLNP26678 52 aa10.32□□□□□ -0.76
H3F3B-208ENST00000589599 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
H3F3B-208ENST00000589599 IGLV5-37A0A075B6J1 123 aa10.31□□□□□ -0.76
H3F3B-208ENST00000589599 MAP1LC3CQ9BXW4 147 aa10.31□□□□□ -0.76
H3F3B-208ENST00000589599 LINC00158P58513 81 aa10.3□□□□□ -0.76
H3F3B-208ENST00000589599 RPL24P83731 157 aaKnown RBP10.3□□□□□ -0.76
H3F3B-208ENST00000589599 LINC00167Q96N53 147 aa10.3□□□□□ -0.76
H3F3B-208ENST00000589599 GAGE10A6NGK3 116 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 H0Y9J4 135 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 ATP6V1G1O75348 118 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 DPM2O94777 84 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
H3F3B-208ENST00000589599 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms