RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 H3BRM9 83 aa10.33□□□□□ -0.76
DNMT1-221ENST00000589538 CXCL5P42830 114 aa10.33□□□□□ -0.76
DNMT1-221ENST00000589538 NDUFA6P56556 154 aa10.33□□□□□ -0.76
DNMT1-221ENST00000589538 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
DNMT1-221ENST00000589538 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
DNMT1-221ENST00000589538 TRGC2P03986 189 aa10.32□□□□□ -0.76
DNMT1-221ENST00000589538 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
DNMT1-221ENST00000589538 C2orf82Q6UX34 121 aa10.32□□□□□ -0.76
DNMT1-221ENST00000589538 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
DNMT1-221ENST00000589538 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
DNMT1-221ENST00000589538 F8VRH5 84 aa10.3□□□□□ -0.76
DNMT1-221ENST00000589538 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-221ENST00000589538 Q6ZRP5 223 aa10.3□□□□□ -0.76
DNMT1-221ENST00000589538 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-221ENST00000589538 COLCA2A8K830 154 aa10.29□□□□□ -0.76
DNMT1-221ENST00000589538 HSBP1O75506 76 aa10.29□□□□□ -0.76
DNMT1-221ENST00000589538 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
DNMT1-221ENST00000589538 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
DNMT1-221ENST00000589538 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
DNMT1-221ENST00000589538 GAGE2EQ4V326 116 aa10.27□□□□□ -0.77
DNMT1-221ENST00000589538 GAGE2DQ9UEU5 116 aa10.27□□□□□ -0.77
DNMT1-221ENST00000589538 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-221ENST00000589538 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
DNMT1-221ENST00000589538 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
DNMT1-221ENST00000589538 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
DNMT1-221ENST00000589538 OXTP01178 125 aa10.25□□□□□ -0.77
DNMT1-221ENST00000589538 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-221ENST00000589538 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
DNMT1-221ENST00000589538 J3QL48 77 aa10.24□□□□□ -0.77
DNMT1-221ENST00000589538 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
DNMT1-221ENST00000589538 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
DNMT1-221ENST00000589538 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
DNMT1-221ENST00000589538 SERF1AO75920 110 aa10.22□□□□□ -0.77
DNMT1-221ENST00000589538 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
DNMT1-221ENST00000589538 SFTA2Q6UW10 78 aa10.22□□□□□ -0.77
DNMT1-221ENST00000589538 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
DNMT1-221ENST00000589538 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
DNMT1-221ENST00000589538 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
DNMT1-221ENST00000589538 MYCBP2O75592 4640 aa10.21□□□□□ -0.78
DNMT1-221ENST00000589538 LEPROTL1O95214 131 aa10.2□□□□□ -0.78
DNMT1-221ENST00000589538 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
DNMT1-221ENST00000589538 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
DNMT1-221ENST00000589538 HSPB8Q9UJY1 196 aa10.2□□□□□ -0.78
DNMT1-221ENST00000589538 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
DNMT1-221ENST00000589538 ODF1Q14990 250 aa10.19□□□□□ -0.78
DNMT1-221ENST00000589538 M0QXV9 152 aa10.18□□□□□ -0.78
DNMT1-221ENST00000589538 SCO1O75880 301 aa10.18□□□□□ -0.78
DNMT1-221ENST00000589538 LINC00310P59036 64 aa10.17□□□□□ -0.78
DNMT1-221ENST00000589538 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
DNMT1-221ENST00000589538 PSORS1C2Q9UIG4 136 aa10.17□□□□□ -0.78
DNMT1-221ENST00000589538 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
DNMT1-221ENST00000589538 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
DNMT1-221ENST00000589538 UBE2BP63146 152 aa10.15□□□□□ -0.78
DNMT1-221ENST00000589538 COX17Q14061 63 aa10.15□□□□□ -0.78
DNMT1-221ENST00000589538 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
DNMT1-221ENST00000589538 H0Y8G0 127 aa10.14□□□□□ -0.79
DNMT1-221ENST00000589538 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
DNMT1-221ENST00000589538 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
DNMT1-221ENST00000589538 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
DNMT1-221ENST00000589538 NUPR1O60356 82 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 FABP4P15090 132 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 PLNP26678 52 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
DNMT1-221ENST00000589538 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
DNMT1-221ENST00000589538 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
DNMT1-221ENST00000589538 PFN2P35080 140 aa10.11□□□□□ -0.79
DNMT1-221ENST00000589538 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
DNMT1-221ENST00000589538 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
DNMT1-221ENST00000589538 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
DNMT1-221ENST00000589538 DPM2O94777 84 aa10.09□□□□□ -0.79
DNMT1-221ENST00000589538 IGLV7-43P04211 117 aa10.09□□□□□ -0.79
DNMT1-221ENST00000589538 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
DNMT1-221ENST00000589538 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
DNMT1-221ENST00000589538 S100A1P23297 94 aa10.08□□□□□ -0.8
DNMT1-221ENST00000589538 HERV-K104P63124 156 aa10.08□□□□□ -0.8
DNMT1-221ENST00000589538 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
DNMT1-221ENST00000589538 LINC00587B1AMM8 73 aa10.07□□□□□ -0.8
DNMT1-221ENST00000589538 HERVK_113P61574 105 aa10.07□□□□□ -0.8
DNMT1-221ENST00000589538 DIRC1Q969H9 104 aa10.07□□□□□ -0.8
DNMT1-221ENST00000589538 IGKCP01834 107 aa10.06□□□□□ -0.8
DNMT1-221ENST00000589538 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
DNMT1-221ENST00000589538 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
DNMT1-221ENST00000589538 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
DNMT1-221ENST00000589538 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
DNMT1-221ENST00000589538 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
DNMT1-221ENST00000589538 LEPROTO15243 131 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1302.2 ms