RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 CAV3P56539 151 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 MT1HP80294 61 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 QRFPP83859 136 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 ASB16-AS1Q495Z4 193 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 C3orf62Q6ZUJ4 267 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 SMIM15Q7Z3B0 74 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 VMO1Q7Z5L0 202 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 Q86TA4 180 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 DEFB106AQ8N104 65 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 OR5A2Q8NGI9 324 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 SKA2Q8WVK7 121 aaPredicted RBP0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 COX14Q96I36 57 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 SPRR2FQ96RM1 72 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 LINC00846Q9NV44 126 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 PLAC8Q9NZF1 115 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 JPT1Q9UK76 154 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 NDUFAF1Q9Y375 327 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 HILPDAQ9Y5L2 63 aa0.23□□□□□ -2.37
HMGN1P30-201ENST00000589286 DEFB131BA0A096LNP1 70 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 A0A096LPF7 62 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 LOC107984156A0A0G2JMH3 177 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 NBDYA0A0U1RRE5 68 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 A0A1B0GW64 132 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 FAM92AA1XBS5 289 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 TMEM189A5PLL7 270 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 BBIP1A8MTZ0 92 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 H0YJX3 145 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 M0QZK8 103 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 UQCRQO14949 82 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 NPFFO15130 113 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 GYPAP02724 150 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 SPINT3P49223 89 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 GTF2A1P52655 376 aaPredicted RBP0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 PSPHP78330 225 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 SPCS2Q15005 226 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 ALX1Q15699 326 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 COX6B2Q6YFQ2 88 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 ARL17AQ8IVW1 177 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 BRK1Q8WUW1 75 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 DPH3Q96FX2 82 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 AP1S3Q96PC3 154 aa0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 FAM103A1Q9BTL3 118 aaKnown RBP0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 MRPL35Q9NZE8 188 aaKnown RBP0.22□□□□□ -2.37
HMGN1P30-201ENST00000589286 A0A087WTM6 91 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 MT1FP04733 61 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 SLC25A5P05141 298 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 PIPP12273 146 aaPredicted RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 EVI2AP22794 236 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 S100GP29377 79 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 ETV6P41212 452 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 SPINK7P58062 85 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 FXYD6P3P58550 94 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 LSM3P62310 102 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 SNRPD3P62318 126 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 WFDC2Q14508 124 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 OR8B8Q15620 311 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 RHOHQ15669 191 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 GLYATL3Q5SZD4 288 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 RPS27LQ71UM5 84 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 TMEM35BQ8NCS4 154 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 C10orf82Q8WW14 230 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 LINC00208Q96KT6 92 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 MRPL36Q9P0J6 103 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 COMMD3Q9UBI1 195 aa0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 SYNE1Q8NF91 8797 aaKnown RBP0.21□□□□□ -2.38
HMGN1P30-201ENST00000589286 LOC100130705A0A1B0GUX0 176 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 LOC101927531A0A1B0GV80 90 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 A0A1B0GV90 55 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 A0A1B0GX51 115 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 GNG14A0A1W2PPG7 69 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 HIGD1CA8MV81 97 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 G3V318 75 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 TSTD3H0UI37 97 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 J3KT08 172 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 M0R129 80 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 CDC42EP2O14613 210 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 EDF1O60869 148 aaKnown RBP0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 PITX3O75364 302 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 MRPL33O75394 65 aaKnown RBP0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 MT2AP02795 61 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEFB130BP0DP73 79 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 DEFB130AP0DP74 79 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 CCL3L1P16619 93 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 KDELR1P24390 212 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 CMPK1P30085 196 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 RBM3P98179 157 aaKnown RBP0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 FXYD3Q14802 87 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 KRTAP19-2Q3LHN2 52 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 LYPD5Q6UWN5 251 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 ZNF720Q7Z2F6 126 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 AKAP14Q86UN6 197 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 C5orf56Q8N8D9 126 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 OR8J3Q8NGG0 315 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 OTOSQ8NHW6 89 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 DYNLRB2Q8TF09 96 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 LEAP2Q969E1 77 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 DMAC1Q96GE9 116 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 LINC01600Q96MT4 127 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 SMIM7Q9BQ49 75 aa0.2□□□□□ -2.38
HMGN1P30-201ENST00000589286 WFDC6Q9BQY6 131 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms