RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 HIST1H2BLQ99880 126 aa9.39□□□□□ -0.91
CNN1-208ENST00000588935 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
CNN1-208ENST00000588935 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
CNN1-208ENST00000588935 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
CNN1-208ENST00000588935 C6orf48Q9UBA6 75 aa9.38□□□□□ -0.91
CNN1-208ENST00000588935 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
CNN1-208ENST00000588935 PLNP26678 52 aa9.37□□□□□ -0.91
CNN1-208ENST00000588935 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
CNN1-208ENST00000588935 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
CNN1-208ENST00000588935 F8WDY8 70 aa9.36□□□□□ -0.91
CNN1-208ENST00000588935 PANO1I0J062 215 aa9.36□□□□□ -0.91
CNN1-208ENST00000588935 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
CNN1-208ENST00000588935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
CNN1-208ENST00000588935 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
CNN1-208ENST00000588935 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
CNN1-208ENST00000588935 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
CNN1-208ENST00000588935 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
CNN1-208ENST00000588935 A0A096LNI7 61 aa9.34□□□□□ -0.91
CNN1-208ENST00000588935 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
CNN1-208ENST00000588935 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
CNN1-208ENST00000588935 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 C20orf202A1L168 122 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 CXCL5P42830 114 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 XGP55808 180 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 HERVK_113P61574 105 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 MAJINQ3KP22 176 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 GAGE2EQ4V326 116 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 STPG4Q8N801 248 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 GAGE2DQ9UEU5 116 aa9.33□□□□□ -0.92
CNN1-208ENST00000588935 TRBV30A0A0K0K1B3 111 aa9.32□□□□□ -0.92
CNN1-208ENST00000588935 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
CNN1-208ENST00000588935 LEPROTO15243 131 aa9.31□□□□□ -0.92
CNN1-208ENST00000588935 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
CNN1-208ENST00000588935 PFN2P35080 140 aa9.3□□□□□ -0.92
CNN1-208ENST00000588935 Q6ZRP5 223 aa9.3□□□□□ -0.92
CNN1-208ENST00000588935 Q6ZSA8 131 aa9.3□□□□□ -0.92
CNN1-208ENST00000588935 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
CNN1-208ENST00000588935 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 TSPEAR-AS2P59090 65 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 PLEKHB2Q96CS7 222 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
CNN1-208ENST00000588935 A0A087WYN8 130 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 J3QQQ9 107 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
CNN1-208ENST00000588935 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 LRP1BQ9NZR2 4599 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
CNN1-208ENST00000588935 E9PLD3 99 aa9.26□□□□□ -0.93
CNN1-208ENST00000588935 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
CNN1-208ENST00000588935 XAGE1AQ9HD64 81 aa9.26□□□□□ -0.93
CNN1-208ENST00000588935 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
CNN1-208ENST00000588935 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 MYMXA0A1B0GTQ4 84 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 LINC00158P58513 81 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
CNN1-208ENST00000588935 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
CNN1-208ENST00000588935 FAM168BA1KXE4 195 aa9.24□□□□□ -0.93
CNN1-208ENST00000588935 ANKRD39Q53RE8 183 aa9.24□□□□□ -0.93
CNN1-208ENST00000588935 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
CNN1-208ENST00000588935 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
CNN1-208ENST00000588935 TTTY13Q9BZ97 58 aa9.23□□□□□ -0.93
CNN1-208ENST00000588935 NMUP48645 174 aa9.22□□□□□ -0.93
CNN1-208ENST00000588935 HERV-K104P63124 156 aa9.22□□□□□ -0.93
CNN1-208ENST00000588935 SFTA2Q6UW10 78 aa9.22□□□□□ -0.93
CNN1-208ENST00000588935 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
CNN1-208ENST00000588935 KIAA1109Q2LD37 5005 aa9.22□□□□□ -0.93
CNN1-208ENST00000588935 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
CNN1-208ENST00000588935 AKR1D1P51857 326 aa9.21□□□□□ -0.94
CNN1-208ENST00000588935 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.94
CNN1-208ENST00000588935 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
CNN1-208ENST00000588935 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
CNN1-208ENST00000588935 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
CNN1-208ENST00000588935 SND1-IT1Q9HBX3 110 aa9.19□□□□□ -0.94
CNN1-208ENST00000588935 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
CNN1-208ENST00000588935 COX17Q14061 63 aa9.18□□□□□ -0.94
CNN1-208ENST00000588935 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
CNN1-208ENST00000588935 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
CNN1-208ENST00000588935 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
CNN1-208ENST00000588935 DAND5Q8N907 189 aa9.18□□□□□ -0.94
CNN1-208ENST00000588935 A0A0J9YXY3 114 aa9.17□□□□□ -0.94
CNN1-208ENST00000588935 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
CNN1-208ENST00000588935 PCP2Q8IVA1 136 aa9.17□□□□□ -0.94
CNN1-208ENST00000588935 MIR7-3HGQ8N6C7 128 aa9.17□□□□□ -0.94
CNN1-208ENST00000588935 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
CNN1-208ENST00000588935 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
CNN1-208ENST00000588935 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
CNN1-208ENST00000588935 NPC2P61916 151 aa9.15□□□□□ -0.94
CNN1-208ENST00000588935 Q8N1X5 172 aa9.15□□□□□ -0.94
CNN1-208ENST00000588935 M0QXV9 152 aa9.14□□□□□ -0.95
CNN1-208ENST00000588935 Q5VSD8 79 aa9.14□□□□□ -0.95
CNN1-208ENST00000588935 C7orf33Q8WU49 177 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms