RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 CDKN2A-AS1Q9UH64 79 aa10.12□□□□□ -0.79
RETREG3-206ENST00000588423 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 HBDP02042 147 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 C10orf25Q5T742 122 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 Q8IZM0 81 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
RETREG3-206ENST00000588423 IGLV5-45A0A087WSX0 123 aa10.1□□□□□ -0.79
RETREG3-206ENST00000588423 SERF1AO75920 110 aa10.1□□□□□ -0.79
RETREG3-206ENST00000588423 PRSS2P07478 247 aa10.1□□□□□ -0.79
RETREG3-206ENST00000588423 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
RETREG3-206ENST00000588423 C6orf48Q9UBA6 75 aa10.1□□□□□ -0.79
RETREG3-206ENST00000588423 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
RETREG3-206ENST00000588423 PDZD11Q5EBL8 140 aa10.09□□□□□ -0.79
RETREG3-206ENST00000588423 NUPR1O60356 82 aa10.08□□□□□ -0.8
RETREG3-206ENST00000588423 HSBP1O75506 76 aa10.08□□□□□ -0.8
RETREG3-206ENST00000588423 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
RETREG3-206ENST00000588423 ATP5LO75964 103 aa10.07□□□□□ -0.8
RETREG3-206ENST00000588423 PMCHL1Q16048 86 aa10.07□□□□□ -0.8
RETREG3-206ENST00000588423 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
RETREG3-206ENST00000588423 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
RETREG3-206ENST00000588423 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
RETREG3-206ENST00000588423 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
RETREG3-206ENST00000588423 CXCL5P42830 114 aa10.06□□□□□ -0.8
RETREG3-206ENST00000588423 NDUFA6P56556 154 aa10.06□□□□□ -0.8
RETREG3-206ENST00000588423 CKS1BP61024 79 aa10.06□□□□□ -0.8
RETREG3-206ENST00000588423 Q6ZRP5 223 aa10.06□□□□□ -0.8
RETREG3-206ENST00000588423 A0A1W2PNN7 141 aa10.05□□□□□ -0.8
RETREG3-206ENST00000588423 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
RETREG3-206ENST00000588423 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
RETREG3-206ENST00000588423 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
RETREG3-206ENST00000588423 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
RETREG3-206ENST00000588423 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
RETREG3-206ENST00000588423 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
RETREG3-206ENST00000588423 F8VRH5 84 aa10.03□□□□□ -0.8
RETREG3-206ENST00000588423 H3BRM9 83 aa10.03□□□□□ -0.8
RETREG3-206ENST00000588423 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
RETREG3-206ENST00000588423 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
RETREG3-206ENST00000588423 COX7B2Q8TF08 81 aa10.02□□□□□ -0.81
RETREG3-206ENST00000588423 OXTP01178 125 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 S100A6P06703 90 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 SPINK8P0C7L1 97 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 GAGE2EQ4V326 116 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 GAGE2DQ9UEU5 116 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
RETREG3-206ENST00000588423 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
RETREG3-206ENST00000588423 LEPROTL1O95214 131 aa9.99□□□□□ -0.81
RETREG3-206ENST00000588423 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
RETREG3-206ENST00000588423 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
RETREG3-206ENST00000588423 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
RETREG3-206ENST00000588423 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
RETREG3-206ENST00000588423 J3QL48 77 aa9.97□□□□□ -0.81
RETREG3-206ENST00000588423 HSPB8Q9UJY1 196 aa9.97□□□□□ -0.81
RETREG3-206ENST00000588423 CHTOPQ9Y3Y2 248 aaKnown RBP9.97□□□□□ -0.81
RETREG3-206ENST00000588423 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
RETREG3-206ENST00000588423 FAM168BA1KXE4 195 aa9.96□□□□□ -0.82
RETREG3-206ENST00000588423 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
RETREG3-206ENST00000588423 SNRPEP62304 92 aaKnown RBP9.96□□□□□ -0.82
RETREG3-206ENST00000588423 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
RETREG3-206ENST00000588423 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.82
RETREG3-206ENST00000588423 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.82
RETREG3-206ENST00000588423 FABP4P15090 132 aa9.95□□□□□ -0.82
RETREG3-206ENST00000588423 ODF1Q14990 250 aa9.95□□□□□ -0.82
RETREG3-206ENST00000588423 FAM19A5Q7Z5A7 132 aaPredicted RBP9.95□□□□□ -0.82
RETREG3-206ENST00000588423 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
RETREG3-206ENST00000588423 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
RETREG3-206ENST00000588423 M0QXV9 152 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 S100A2P29034 98 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 SPINK6Q6UWN8 80 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 HIST1H2BLQ99880 126 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
RETREG3-206ENST00000588423 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
RETREG3-206ENST00000588423 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
RETREG3-206ENST00000588423 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
RETREG3-206ENST00000588423 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
RETREG3-206ENST00000588423 XAGE1AQ9HD64 81 aa9.9□□□□□ -0.82
RETREG3-206ENST00000588423 LRP1Q07954 4544 aaKnown RBP9.9□□□□□ -0.82
RETREG3-206ENST00000588423 HERC1Q15751 4861 aa9.89□□□□□ -0.83
RETREG3-206ENST00000588423 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
RETREG3-206ENST00000588423 SYS1-DBNDD2H3BUS1 97 aa9.89□□□□□ -0.83
RETREG3-206ENST00000588423 C3orf79P0CE67 100 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 COX17Q14061 63 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 C1orf137Q5JT78 98 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
RETREG3-206ENST00000588423 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
RETREG3-206ENST00000588423 UBE2BP63146 152 aa9.87□□□□□ -0.83
RETREG3-206ENST00000588423 C22orf24Q9Y442 160 aa9.87□□□□□ -0.83
RETREG3-206ENST00000588423 LBHQ53QV2 105 aaPredicted RBP9.86□□□□□ -0.83
RETREG3-206ENST00000588423 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
RETREG3-206ENST00000588423 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
RETREG3-206ENST00000588423 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
RETREG3-206ENST00000588423 LINC01545Q5VT33 79 aa9.85□□□□□ -0.83
RETREG3-206ENST00000588423 H0Y8G0 127 aa9.84□□□□□ -0.83
RETREG3-206ENST00000588423 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
RETREG3-206ENST00000588423 PLNP26678 52 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms