RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC130-208ENST00000588071 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
CCDC130-208ENST00000588071 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 SFTA2Q6UW10 78 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
CCDC130-208ENST00000588071 S100A12P80511 92 aa9.18□□□□□ -0.94
CCDC130-208ENST00000588071 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
CCDC130-208ENST00000588071 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
CCDC130-208ENST00000588071 SPATA45Q537H7 98 aa9.17□□□□□ -0.94
CCDC130-208ENST00000588071 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
CCDC130-208ENST00000588071 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
CCDC130-208ENST00000588071 DNAH2Q9P225 4427 aa9.17□□□□□ -0.94
CCDC130-208ENST00000588071 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 ZNF815PA8K554 130 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 HERV-K104P63124 156 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
CCDC130-208ENST00000588071 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
CCDC130-208ENST00000588071 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
CCDC130-208ENST00000588071 MEIG1Q5JSS6 88 aa9.15□□□□□ -0.94
CCDC130-208ENST00000588071 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
CCDC130-208ENST00000588071 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
CCDC130-208ENST00000588071 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.94
CCDC130-208ENST00000588071 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
CCDC130-208ENST00000588071 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
CCDC130-208ENST00000588071 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
CCDC130-208ENST00000588071 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
CCDC130-208ENST00000588071 PFN2P35080 140 aa9.13□□□□□ -0.95
CCDC130-208ENST00000588071 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
CCDC130-208ENST00000588071 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
CCDC130-208ENST00000588071 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 GCSHP23434 173 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 LINC00158P58513 81 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
CCDC130-208ENST00000588071 SCGB1D4Q6XE38 83 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
CCDC130-208ENST00000588071 A0A0J9YXY3 114 aa9.11□□□□□ -0.95
CCDC130-208ENST00000588071 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
CCDC130-208ENST00000588071 COX8AP10176 69 aa9.11□□□□□ -0.95
CCDC130-208ENST00000588071 RPL18AQ02543 176 aaKnown RBP9.11□□□□□ -0.95
CCDC130-208ENST00000588071 COX17Q14061 63 aa9.11□□□□□ -0.95
CCDC130-208ENST00000588071 SMIM13P0DJ93 91 aa9.1□□□□□ -0.95
CCDC130-208ENST00000588071 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
CCDC130-208ENST00000588071 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
CCDC130-208ENST00000588071 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
CCDC130-208ENST00000588071 RYR2Q92736 4967 aa9.09□□□□□ -0.95
CCDC130-208ENST00000588071 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
CCDC130-208ENST00000588071 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
CCDC130-208ENST00000588071 BOD1L2Q8IYS8 172 aa9.09□□□□□ -0.95
CCDC130-208ENST00000588071 C12orf57Q99622 126 aa9.09□□□□□ -0.95
CCDC130-208ENST00000588071 C16orf90A8MZG2 172 aa9.08□□□□□ -0.96
CCDC130-208ENST00000588071 DLEU1O43261 78 aa9.08□□□□□ -0.96
CCDC130-208ENST00000588071 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
CCDC130-208ENST00000588071 SDIM1Q6ZPB5 146 aa9.08□□□□□ -0.96
CCDC130-208ENST00000588071 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
CCDC130-208ENST00000588071 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
CCDC130-208ENST00000588071 Q6ZRP5 223 aa9.07□□□□□ -0.96
CCDC130-208ENST00000588071 TIMM17BO60830 172 aa9.06□□□□□ -0.96
CCDC130-208ENST00000588071 MIR7-3HGQ8N6C7 128 aa9.06□□□□□ -0.96
CCDC130-208ENST00000588071 FAT2Q9NYQ8 4349 aa9.05□□□□□ -0.96
CCDC130-208ENST00000588071 A0A096LNI7 61 aa9.05□□□□□ -0.96
CCDC130-208ENST00000588071 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
CCDC130-208ENST00000588071 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
CCDC130-208ENST00000588071 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
CCDC130-208ENST00000588071 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 DAND5Q8N907 189 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 PRO1933Q9H354 126 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 LINC00474Q9P2X8 69 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
CCDC130-208ENST00000588071 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
CCDC130-208ENST00000588071 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
CCDC130-208ENST00000588071 UQCR10Q9UDW1 63 aa9.03□□□□□ -0.96
CCDC130-208ENST00000588071 SRSF9Q13242 221 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCDC130-208ENST00000588071 LITAFQ99732 161 aa9.02□□□□□ -0.97
CCDC130-208ENST00000588071 NPC2P61916 151 aa9.01□□□□□ -0.97
CCDC130-208ENST00000588071 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
CCDC130-208ENST00000588071 MIEN1Q9BRT3 115 aa9.01□□□□□ -0.97
CCDC130-208ENST00000588071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
CCDC130-208ENST00000588071 COPS9Q8WXC6 57 aa9□□□□□ -0.97
CCDC130-208ENST00000588071 SPANXDQ9BXN6 97 aa9□□□□□ -0.97
CCDC130-208ENST00000588071 SPANXCQ9NY87 97 aa9□□□□□ -0.97
CCDC130-208ENST00000588071 HIGD1BQ9P298 99 aa9□□□□□ -0.97
CCDC130-208ENST00000588071 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
CCDC130-208ENST00000588071 Q6ZVH6 145 aa8.99□□□□□ -0.97
CCDC130-208ENST00000588071 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
CCDC130-208ENST00000588071 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
CCDC130-208ENST00000588071 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
CCDC130-208ENST00000588071 PKD1P98161 4303 aa8.99□□□□□ -0.97
CCDC130-208ENST00000588071 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
CCDC130-208ENST00000588071 PANO1I0J062 215 aa8.98□□□□□ -0.97
CCDC130-208ENST00000588071 IFITM1P13164 125 aa8.98□□□□□ -0.97
CCDC130-208ENST00000588071 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms