RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 LRP1BQ9NZR2 4599 aa6.89□□□□□ -1.31
SMARCA4-213ENST00000587988 PRSS2P07478 247 aa6.89□□□□□ -1.31
SMARCA4-213ENST00000587988 PLNP26678 52 aa6.89□□□□□ -1.31
SMARCA4-213ENST00000587988 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
SMARCA4-213ENST00000587988 FAM30AQ9NZY2 134 aa6.89□□□□□ -1.31
SMARCA4-213ENST00000587988 F8WDY8 70 aa6.88□□□□□ -1.31
SMARCA4-213ENST00000587988 NDUFA1O15239 70 aa6.88□□□□□ -1.31
SMARCA4-213ENST00000587988 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
SMARCA4-213ENST00000587988 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
SMARCA4-213ENST00000587988 C9orf116Q5BN46 136 aaPredicted RBP6.87□□□□□ -1.31
SMARCA4-213ENST00000587988 PANO1I0J062 215 aa6.86□□□□□ -1.31
SMARCA4-213ENST00000587988 CKS1BP61024 79 aa6.86□□□□□ -1.31
SMARCA4-213ENST00000587988 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
SMARCA4-213ENST00000587988 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 CXCL5P42830 114 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 HAMPP81172 84 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 STPG4Q8N801 248 aa6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
SMARCA4-213ENST00000587988 A0A096LNI7 61 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 C20orf202A1L168 122 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 LEPROTO15243 131 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 CHTF8P0CG12 524 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 Q6ZSA8 131 aa6.84□□□□□ -1.31
SMARCA4-213ENST00000587988 IGKV2-24A0A0C4DH68 120 aa6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 LOC107984640A0A0U1RRK4 108 aa6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 XGP55808 180 aa6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 HERVK_113P61574 105 aa6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
SMARCA4-213ENST00000587988 E9PLD3 99 aa6.82□□□□□ -1.32
SMARCA4-213ENST00000587988 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
SMARCA4-213ENST00000587988 RPL18AQ02543 176 aaKnown RBP6.82□□□□□ -1.32
SMARCA4-213ENST00000587988 Q6ZRP5 223 aa6.82□□□□□ -1.32
SMARCA4-213ENST00000587988 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
SMARCA4-213ENST00000587988 IGKV2D-26A0A0A0MRZ7 120 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 J3QQQ9 107 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 CIRBPQ14011 172 aaKnown RBP6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 MAJINQ3KP22 176 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 GAGE2EQ4V326 116 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 GAGE2DQ9UEU5 116 aa6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
SMARCA4-213ENST00000587988 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 SCGB1D1O95968 90 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
SMARCA4-213ENST00000587988 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
SMARCA4-213ENST00000587988 LGALS3P17931 250 aaKnown RBP6.79□□□□□ -1.32
SMARCA4-213ENST00000587988 PFN2P35080 140 aa6.79□□□□□ -1.32
SMARCA4-213ENST00000587988 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
SMARCA4-213ENST00000587988 PKIGQ9Y2B9 76 aa6.79□□□□□ -1.32
SMARCA4-213ENST00000587988 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 A0A087WYN8 130 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 MYMXA0A1B0GTQ4 84 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 SFTA2Q6UW10 78 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
SMARCA4-213ENST00000587988 A0A0U1RRA0 63 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 NMUP48645 174 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 AKR1D1P51857 326 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
SMARCA4-213ENST00000587988 FAM168BA1KXE4 195 aa6.76□□□□□ -1.33
SMARCA4-213ENST00000587988 SMIM13P0DJ93 91 aa6.76□□□□□ -1.33
SMARCA4-213ENST00000587988 HERV-K104P63124 156 aa6.76□□□□□ -1.33
SMARCA4-213ENST00000587988 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
SMARCA4-213ENST00000587988 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
SMARCA4-213ENST00000587988 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 LINC00158P58513 81 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 COX17Q14061 63 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 MEIG1Q5JSS6 88 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 HSPG2P98160 4391 aa6.75□□□□□ -1.33
SMARCA4-213ENST00000587988 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 EPM2AB3EWF7 344 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 PYY3Q5JQD4 70 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 PCP2Q8IVA1 136 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 SND1-IT1Q9HBX3 110 aa6.74□□□□□ -1.33
SMARCA4-213ENST00000587988 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
SMARCA4-213ENST00000587988 DAND5Q8N907 189 aa6.73□□□□□ -1.33
SMARCA4-213ENST00000587988 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
SMARCA4-213ENST00000587988 FAM19A5Q7Z5A7 132 aaPredicted RBP6.72□□□□□ -1.33
SMARCA4-213ENST00000587988 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
SMARCA4-213ENST00000587988 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.34
SMARCA4-213ENST00000587988 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
SMARCA4-213ENST00000587988 Q8NDZ9 215 aa6.71□□□□□ -1.34
SMARCA4-213ENST00000587988 LITAFQ99732 161 aa6.71□□□□□ -1.34
SMARCA4-213ENST00000587988 TP73-AS1Q9UF72 201 aa6.71□□□□□ -1.34
SMARCA4-213ENST00000587988 RYR1P21817 5038 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms