RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-205ENST00000587220 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
ZNF540-205ENST00000587220 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
ZNF540-205ENST00000587220 ERASQ7Z444 233 aa6.89□□□□□ -1.31
ZNF540-205ENST00000587220 CEND1Q8N111 149 aa6.89□□□□□ -1.31
ZNF540-205ENST00000587220 PCP4P48539 62 aa6.88□□□□□ -1.31
ZNF540-205ENST00000587220 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
ZNF540-205ENST00000587220 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
ZNF540-205ENST00000587220 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
ZNF540-205ENST00000587220 MRPL35Q9NZE8 188 aaKnown RBP6.88□□□□□ -1.31
ZNF540-205ENST00000587220 IGHV3-64A0A075B6Q5 118 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-205ENST00000587220 H3BUT2 72 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 GAS8-AS1O95177 125 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
ZNF540-205ENST00000587220 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
ZNF540-205ENST00000587220 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 E9PLD3 99 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 CHTOPQ9Y3Y2 248 aaKnown RBP6.86□□□□□ -1.31
ZNF540-205ENST00000587220 SPCS1Q9Y6A9 102 aa6.86□□□□□ -1.31
ZNF540-205ENST00000587220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-205ENST00000587220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-205ENST00000587220 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-205ENST00000587220 A6NJY4 79 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 H7C423 109 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 I3L3M4 83 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 TMEM101Q96IK0 257 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
ZNF540-205ENST00000587220 FXYD2P54710 66 aa6.84□□□□□ -1.31
ZNF540-205ENST00000587220 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-205ENST00000587220 C2orf66Q6UXQ4 117 aa6.84□□□□□ -1.31
ZNF540-205ENST00000587220 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
ZNF540-205ENST00000587220 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
ZNF540-205ENST00000587220 F8W1H4 67 aa6.83□□□□□ -1.32
ZNF540-205ENST00000587220 PANO1I0J062 215 aa6.83□□□□□ -1.32
ZNF540-205ENST00000587220 VCYO14598 125 aa6.83□□□□□ -1.32
ZNF540-205ENST00000587220 POLR2KP53803 58 aaKnown RBP6.83□□□□□ -1.32
ZNF540-205ENST00000587220 HERVK_113P61574 105 aa6.83□□□□□ -1.32
ZNF540-205ENST00000587220 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-205ENST00000587220 TRBV27A0A0K0K1C4 114 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 OXTP01178 125 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 XCL1P47992 114 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 HIST1H4GQ99525 98 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
ZNF540-205ENST00000587220 IGIPA6NJ69 53 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 J3QR89 54 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 TSHBP01222 138 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 SLPIP03973 132 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 PMVKQ15126 192 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
ZNF540-205ENST00000587220 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-205ENST00000587220 A0A087WYN8 130 aa6.8□□□□□ -1.32
ZNF540-205ENST00000587220 COX6A2Q02221 97 aa6.8□□□□□ -1.32
ZNF540-205ENST00000587220 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
ZNF540-205ENST00000587220 SS18Q15532 418 aa6.8□□□□□ -1.32
ZNF540-205ENST00000587220 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
ZNF540-205ENST00000587220 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
ZNF540-205ENST00000587220 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
ZNF540-205ENST00000587220 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-205ENST00000587220 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 LINC00959A0A1B0GUT2 108 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 SMAGPQ0VAQ4 97 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 FOXI1Q12951 378 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
ZNF540-205ENST00000587220 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
ZNF540-205ENST00000587220 UBE2D1P51668 147 aa6.78□□□□□ -1.32
ZNF540-205ENST00000587220 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
ZNF540-205ENST00000587220 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
ZNF540-205ENST00000587220 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
ZNF540-205ENST00000587220 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
ZNF540-205ENST00000587220 IGHV1-58A0A0C4DH39 117 aa6.77□□□□□ -1.33
ZNF540-205ENST00000587220 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
ZNF540-205ENST00000587220 CDC42SE2Q9NRR3 84 aa6.77□□□□□ -1.33
ZNF540-205ENST00000587220 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
ZNF540-205ENST00000587220 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
ZNF540-205ENST00000587220 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
ZNF540-205ENST00000587220 LINC00474Q9P2X8 69 aa6.76□□□□□ -1.33
ZNF540-205ENST00000587220 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
ZNF540-205ENST00000587220 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 K7ERJ3 54 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 MALP21145 153 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 CARD19Q96LW7 228 aa6.75□□□□□ -1.33
ZNF540-205ENST00000587220 VCX2Q9H322 139 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms