RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 HIST1H2BBP33778 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BDP58876 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 KRTAP10-4P60372 401 aaPredicted RBP11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BCP62807 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST2H2BEQ16778 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.91□□□□□ -0.5
ATG4D-203ENST00000585752 Q6ZRU5 148 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BHQ93079 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BNQ99877 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BMQ99879 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 CKS1BP61024 79 aa11.9□□□□□ -0.5
ATG4D-203ENST00000585752 C6orf226Q5I0X4 101 aa11.9□□□□□ -0.5
ATG4D-203ENST00000585752 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
ATG4D-203ENST00000585752 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
ATG4D-203ENST00000585752 H0Y8G0 127 aa11.89□□□□□ -0.51
ATG4D-203ENST00000585752 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
ATG4D-203ENST00000585752 FABP4P15090 132 aa11.88□□□□□ -0.51
ATG4D-203ENST00000585752 LINC00474Q9P2X8 69 aa11.88□□□□□ -0.51
ATG4D-203ENST00000585752 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
ATG4D-203ENST00000585752 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
ATG4D-203ENST00000585752 LOC107984640A0A0U1RRK4 108 aa11.87□□□□□ -0.51
ATG4D-203ENST00000585752 LINC00310P59036 64 aa11.87□□□□□ -0.51
ATG4D-203ENST00000585752 Q8IZM0 81 aa11.87□□□□□ -0.51
ATG4D-203ENST00000585752 SPINK8P0C7L1 97 aa11.86□□□□□ -0.51
ATG4D-203ENST00000585752 RPL18AQ02543 176 aaKnown RBP11.86□□□□□ -0.51
ATG4D-203ENST00000585752 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
ATG4D-203ENST00000585752 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
ATG4D-203ENST00000585752 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
ATG4D-203ENST00000585752 STPG4Q8N801 248 aa11.86□□□□□ -0.51
ATG4D-203ENST00000585752 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
ATG4D-203ENST00000585752 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
ATG4D-203ENST00000585752 NUPR1O60356 82 aa11.85□□□□□ -0.51
ATG4D-203ENST00000585752 UNQ6190/PRO20217Q6UXQ8 127 aa11.85□□□□□ -0.51
ATG4D-203ENST00000585752 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
ATG4D-203ENST00000585752 CXCL5P42830 114 aa11.84□□□□□ -0.51
ATG4D-203ENST00000585752 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
ATG4D-203ENST00000585752 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
ATG4D-203ENST00000585752 COX7B2Q8TF08 81 aa11.84□□□□□ -0.51
ATG4D-203ENST00000585752 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
ATG4D-203ENST00000585752 F8VRH5 84 aa11.83□□□□□ -0.52
ATG4D-203ENST00000585752 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-203ENST00000585752 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
ATG4D-203ENST00000585752 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
ATG4D-203ENST00000585752 PKHD1L1Q86WI1 4243 aa11.82□□□□□ -0.52
ATG4D-203ENST00000585752 A0A096LNI7 61 aa11.82□□□□□ -0.52
ATG4D-203ENST00000585752 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
ATG4D-203ENST00000585752 HNRNPA3P51991 378 aaKnown RBP11.81□□□□□ -0.52
ATG4D-203ENST00000585752 C10orf25Q5T742 122 aa11.81□□□□□ -0.52
ATG4D-203ENST00000585752 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
ATG4D-203ENST00000585752 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
ATG4D-203ENST00000585752 PLNP26678 52 aa11.78□□□□□ -0.52
ATG4D-203ENST00000585752 ODF1Q14990 250 aa11.78□□□□□ -0.52
ATG4D-203ENST00000585752 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
ATG4D-203ENST00000585752 GAGE2EQ4V326 116 aa11.76□□□□□ -0.53
ATG4D-203ENST00000585752 COA6Q5JTJ3 125 aaKnown RBP11.76□□□□□ -0.53
ATG4D-203ENST00000585752 GAGE2DQ9UEU5 116 aa11.76□□□□□ -0.53
ATG4D-203ENST00000585752 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
ATG4D-203ENST00000585752 DPM2O94777 84 aa11.75□□□□□ -0.53
ATG4D-203ENST00000585752 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
ATG4D-203ENST00000585752 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
ATG4D-203ENST00000585752 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 IGKCP01834 107 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 S100A6P06703 90 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 HERVK_113P61574 105 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 SFTA2Q6UW10 78 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 Q6ZRP5 223 aa11.73□□□□□ -0.53
ATG4D-203ENST00000585752 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
ATG4D-203ENST00000585752 PMCHL2Q9BQD1 86 aa11.72□□□□□ -0.53
ATG4D-203ENST00000585752 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
ATG4D-203ENST00000585752 SYS1-DBNDD2H3BUS1 97 aa11.71□□□□□ -0.53
ATG4D-203ENST00000585752 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.54
ATG4D-203ENST00000585752 S100A2P29034 98 aa11.7□□□□□ -0.54
ATG4D-203ENST00000585752 KRTDAPP60985 99 aa11.69□□□□□ -0.54
ATG4D-203ENST00000585752 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
ATG4D-203ENST00000585752 C20orf202A1L168 122 aa11.67□□□□□ -0.54
ATG4D-203ENST00000585752 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
ATG4D-203ENST00000585752 PFN2P35080 140 aa11.66□□□□□ -0.54
ATG4D-203ENST00000585752 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
ATG4D-203ENST00000585752 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
ATG4D-203ENST00000585752 ZNF625Q96I27 306 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-203ENST00000585752 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
ATG4D-203ENST00000585752 C3orf79P0CE67 100 aa11.65□□□□□ -0.54
ATG4D-203ENST00000585752 FAM19A5Q7Z5A7 132 aaPredicted RBP11.65□□□□□ -0.54
ATG4D-203ENST00000585752 LEPROTO15243 131 aa11.64□□□□□ -0.55
ATG4D-203ENST00000585752 XAGE1AQ9HD64 81 aa11.64□□□□□ -0.55
ATG4D-203ENST00000585752 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
ATG4D-203ENST00000585752 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
ATG4D-203ENST00000585752 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
ATG4D-203ENST00000585752 COX17Q14061 63 aa11.63□□□□□ -0.55
ATG4D-203ENST00000585752 LINC01545Q5VT33 79 aa11.63□□□□□ -0.55
ATG4D-203ENST00000585752 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
ATG4D-203ENST00000585752 HERV-K104P63124 156 aa11.62□□□□□ -0.55
ATG4D-203ENST00000585752 MEIG1Q5JSS6 88 aa11.62□□□□□ -0.55
ATG4D-203ENST00000585752 FAM168BA1KXE4 195 aa11.61□□□□□ -0.55
ATG4D-203ENST00000585752 LINC00587B1AMM8 73 aa11.61□□□□□ -0.55
ATG4D-203ENST00000585752 AKR1D1P51857 326 aa11.61□□□□□ -0.55
ATG4D-203ENST00000585752 LINC00158P58513 81 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms