RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 TOMM7Q9P0U1 55 aa14.85□□□□□ -0.03
LSM7-202ENST00000585395 NUPR1O60356 82 aa14.84□□□□□ -0.03
LSM7-202ENST00000585395 FABP4P15090 132 aa14.84□□□□□ -0.03
LSM7-202ENST00000585395 RNF151Q2KHN1 245 aa14.84□□□□□ -0.03
LSM7-202ENST00000585395 C6orf226Q5I0X4 101 aa14.84□□□□□ -0.03
LSM7-202ENST00000585395 Q8IZM0 81 aa14.84□□□□□ -0.03
LSM7-202ENST00000585395 PLA2G1BP04054 148 aaKnown RBP14.83□□□□□ -0.04
LSM7-202ENST00000585395 CKS1BP61024 79 aa14.83□□□□□ -0.04
LSM7-202ENST00000585395 Q6ZRU5 148 aa14.83□□□□□ -0.04
LSM7-202ENST00000585395 MRPL35Q9NZE8 188 aaKnown RBP14.83□□□□□ -0.04
LSM7-202ENST00000585395 F8VRH5 84 aa14.82□□□□□ -0.04
LSM7-202ENST00000585395 CXCL5P42830 114 aa14.82□□□□□ -0.04
LSM7-202ENST00000585395 COA6Q5JTJ3 125 aaKnown RBP14.82□□□□□ -0.04
LSM7-202ENST00000585395 SERTAD4-AS1Q5TG53 156 aa14.82□□□□□ -0.04
LSM7-202ENST00000585395 MAP1LC3CQ9BXW4 147 aa14.82□□□□□ -0.04
LSM7-202ENST00000585395 SMIM1B2RUZ4 78 aa14.81□□□□□ -0.04
LSM7-202ENST00000585395 LINC00474Q9P2X8 69 aa14.81□□□□□ -0.04
LSM7-202ENST00000585395 LOC107984640A0A0U1RRK4 108 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 KIAA0087Q14695 138 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 TMEM170BQ5T4T1 132 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 CIRBP-AS1Q8TBR5 109 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 DPH3Q96FX2 82 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 HMCN2Q8NDA2 5059 aa14.8□□□□□ -0.04
LSM7-202ENST00000585395 TRBV30A0A0K0K1B3 111 aa14.79□□□□□ -0.04
LSM7-202ENST00000585395 KRTAP29-1A8MX34 341 aaPredicted RBP14.79□□□□□ -0.04
LSM7-202ENST00000585395 H0Y8G0 127 aa14.79□□□□□ -0.04
LSM7-202ENST00000585395 ZNF22P17026 224 aaPredicted RBP14.79□□□□□ -0.04
LSM7-202ENST00000585395 C11orf86A6NJI1 115 aa14.78□□□□□ -0.04
LSM7-202ENST00000585395 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
LSM7-202ENST00000585395 COX7B2Q8TF08 81 aa14.78□□□□□ -0.04
LSM7-202ENST00000585395 UNQ6190/PRO20217Q6UXQ8 127 aa14.76□□□□□ -0.05
LSM7-202ENST00000585395 PLNP26678 52 aa14.75□□□□□ -0.05
LSM7-202ENST00000585395 ODF1Q14990 250 aa14.75□□□□□ -0.05
LSM7-202ENST00000585395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.74□□□□□ -0.05
LSM7-202ENST00000585395 IGKV2-24A0A0C4DH68 120 aa14.73□□□□□ -0.05
LSM7-202ENST00000585395 CIRBPQ14011 172 aaKnown RBP14.73□□□□□ -0.05
LSM7-202ENST00000585395 C2orf82Q6UX34 121 aa14.73□□□□□ -0.05
LSM7-202ENST00000585395 C6orf48Q9UBA6 75 aa14.73□□□□□ -0.05
LSM7-202ENST00000585395 S100A6P06703 90 aa14.72□□□□□ -0.05
LSM7-202ENST00000585395 RPL18AQ02543 176 aaKnown RBP14.72□□□□□ -0.05
LSM7-202ENST00000585395 SFTA2Q6UW10 78 aa14.72□□□□□ -0.05
LSM7-202ENST00000585395 SPACA4Q8TDM5 124 aa14.72□□□□□ -0.05
LSM7-202ENST00000585395 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 DPM2O94777 84 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 TLX1NBP0CAT3 122 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 MAJINQ3KP22 176 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 C10orf25Q5T742 122 aa14.71□□□□□ -0.05
LSM7-202ENST00000585395 A0A096LNI7 61 aa14.7□□□□□ -0.06
LSM7-202ENST00000585395 PTTG1IPP53801 180 aa14.7□□□□□ -0.06
LSM7-202ENST00000585395 SYS1-DBNDD2H3BUS1 97 aa14.69□□□□□ -0.06
LSM7-202ENST00000585395 CHTF8P0CG12 524 aa14.69□□□□□ -0.06
LSM7-202ENST00000585395 DNAH8Q96JB1 4490 aa14.69□□□□□ -0.06
LSM7-202ENST00000585395 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
LSM7-202ENST00000585395 HERVK_113P61574 105 aa14.68□□□□□ -0.06
LSM7-202ENST00000585395 PET117Q6UWS5 81 aa14.68□□□□□ -0.06
LSM7-202ENST00000585395 NDUFC2-KCTD14E9PQ53 114 aa14.67□□□□□ -0.06
LSM7-202ENST00000585395 PANO1I0J062 215 aa14.67□□□□□ -0.06
LSM7-202ENST00000585395 IGKCP01834 107 aa14.67□□□□□ -0.06
LSM7-202ENST00000585395 S100A2P29034 98 aa14.67□□□□□ -0.06
LSM7-202ENST00000585395 RPL37AP61513 92 aaKnown RBP14.66□□□□□ -0.06
LSM7-202ENST00000585395 A0A087WYN8 130 aa14.65□□□□□ -0.06
LSM7-202ENST00000585395 STPG4Q8N801 248 aa14.65□□□□□ -0.06
LSM7-202ENST00000585395 C20orf202A1L168 122 aa14.64□□□□□ -0.07
LSM7-202ENST00000585395 AKR1D1P51857 326 aa14.64□□□□□ -0.07
LSM7-202ENST00000585395 PLAC8Q9NZF1 115 aa14.64□□□□□ -0.07
LSM7-202ENST00000585395 PLA2G2DQ9UNK4 145 aa14.63□□□□□ -0.07
LSM7-202ENST00000585395 KRTDAPP60985 99 aa14.62□□□□□ -0.07
LSM7-202ENST00000585395 PMCHL2Q9BQD1 86 aa14.62□□□□□ -0.07
LSM7-202ENST00000585395 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
LSM7-202ENST00000585395 Q6ZRP5 223 aa14.61□□□□□ -0.07
LSM7-202ENST00000585395 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
LSM7-202ENST00000585395 C3orf79P0CE67 100 aa14.6□□□□□ -0.07
LSM7-202ENST00000585395 C9orf116Q5BN46 136 aaPredicted RBP14.6□□□□□ -0.07
LSM7-202ENST00000585395 LINC01545Q5VT33 79 aa14.6□□□□□ -0.07
LSM7-202ENST00000585395 PLEKHB2Q96CS7 222 aa14.6□□□□□ -0.07
LSM7-202ENST00000585395 C7orf33Q8WU49 177 aa14.59□□□□□ -0.07
LSM7-202ENST00000585395 HIST3H2BBQ8N257 126 aa14.58□□□□□ -0.08
LSM7-202ENST00000585395 LEPROTO15243 131 aa14.57□□□□□ -0.08
LSM7-202ENST00000585395 COX17Q14061 63 aa14.57□□□□□ -0.08
LSM7-202ENST00000585395 HERV-K104P63124 156 aa14.56□□□□□ -0.08
LSM7-202ENST00000585395 LINC00587B1AMM8 73 aa14.55□□□□□ -0.08
LSM7-202ENST00000585395 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
LSM7-202ENST00000585395 LRP1Q07954 4544 aaKnown RBP14.54□□□□□ -0.08
LSM7-202ENST00000585395 MYMXA0A1B0GTQ4 84 aa14.54□□□□□ -0.08
LSM7-202ENST00000585395 ZNF625Q96I27 306 aaPredicted RBP14.54□□□□□ -0.08
LSM7-202ENST00000585395 OXTP01178 125 aa14.53□□□□□ -0.08
LSM7-202ENST00000585395 LGALS3P17931 250 aaKnown RBP14.53□□□□□ -0.08
LSM7-202ENST00000585395 HIST1H2BLQ99880 126 aa14.53□□□□□ -0.08
LSM7-202ENST00000585395 NDUFA12Q9UI09 145 aa14.53□□□□□ -0.08
LSM7-202ENST00000585395 NMUP48645 174 aa14.52□□□□□ -0.09
LSM7-202ENST00000585395 SNRPEP62304 92 aaKnown RBP14.52□□□□□ -0.09
LSM7-202ENST00000585395 J3QQQ9 107 aa14.51□□□□□ -0.09
LSM7-202ENST00000585395 PFN2P35080 140 aa14.51□□□□□ -0.09
LSM7-202ENST00000585395 E9PLD3 99 aa14.5□□□□□ -0.09
LSM7-202ENST00000585395 KRTAP10-4P60372 401 aaPredicted RBP14.5□□□□□ -0.09
LSM7-202ENST00000585395 MEIG1Q5JSS6 88 aa14.5□□□□□ -0.09
LSM7-202ENST00000585395 A0A1W2PNN7 141 aa14.49□□□□□ -0.09
LSM7-202ENST00000585395 C5orf52A6NGY3 159 aa14.48□□□□□ -0.09
LSM7-202ENST00000585395 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1033.9 ms