RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
ITGB4-211ENST00000584374 C15orf56Q8N910 161 aa11.14□□□□□ -0.63
ITGB4-211ENST00000584374 NTN5Q8WTR8 489 aaPredicted RBP11.14□□□□□ -0.63
ITGB4-211ENST00000584374 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.13□□□□□ -0.63
ITGB4-211ENST00000584374 Q8IZM0 81 aa11.13□□□□□ -0.63
ITGB4-211ENST00000584374 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
ITGB4-211ENST00000584374 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 F8WDY8 70 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 GCSHP23434 173 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 CXCL5P42830 114 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 Q8N1X5 172 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 CAMK2N2Q96S95 79 aa11.12□□□□□ -0.63
ITGB4-211ENST00000584374 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
ITGB4-211ENST00000584374 NDUFA1O15239 70 aa11.1□□□□□ -0.63
ITGB4-211ENST00000584374 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
ITGB4-211ENST00000584374 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
ITGB4-211ENST00000584374 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
ITGB4-211ENST00000584374 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
ITGB4-211ENST00000584374 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
ITGB4-211ENST00000584374 LEPROTO15243 131 aa11.09□□□□□ -0.63
ITGB4-211ENST00000584374 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
ITGB4-211ENST00000584374 STPG4Q8N801 248 aa11.08□□□□□ -0.64
ITGB4-211ENST00000584374 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
ITGB4-211ENST00000584374 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
ITGB4-211ENST00000584374 E9PLD3 99 aa11.07□□□□□ -0.64
ITGB4-211ENST00000584374 LINC00526Q96FQ7 95 aa11.07□□□□□ -0.64
ITGB4-211ENST00000584374 FAM30AQ9NZY2 134 aa11.06□□□□□ -0.64
ITGB4-211ENST00000584374 J3QQQ9 107 aa11.05□□□□□ -0.64
ITGB4-211ENST00000584374 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
ITGB4-211ENST00000584374 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
ITGB4-211ENST00000584374 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
ITGB4-211ENST00000584374 MYMXA0A1B0GTQ4 84 aa11.04□□□□□ -0.64
ITGB4-211ENST00000584374 NMUP48645 174 aa11.04□□□□□ -0.64
ITGB4-211ENST00000584374 HAMPP81172 84 aa11.04□□□□□ -0.64
ITGB4-211ENST00000584374 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
ITGB4-211ENST00000584374 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
ITGB4-211ENST00000584374 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
ITGB4-211ENST00000584374 Q6ZSA8 131 aa11.03□□□□□ -0.64
ITGB4-211ENST00000584374 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
ITGB4-211ENST00000584374 HERV-K104P63124 156 aa11.02□□□□□ -0.65
ITGB4-211ENST00000584374 S100A12P80511 92 aa11.02□□□□□ -0.65
ITGB4-211ENST00000584374 Q6ZRU5 148 aa11.02□□□□□ -0.65
ITGB4-211ENST00000584374 LINC00587B1AMM8 73 aa11.01□□□□□ -0.65
ITGB4-211ENST00000584374 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
ITGB4-211ENST00000584374 LINC01620Q4KN68 170 aa11.01□□□□□ -0.65
ITGB4-211ENST00000584374 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
ITGB4-211ENST00000584374 UNQ6190/PRO20217Q6UXQ8 127 aa11.01□□□□□ -0.65
ITGB4-211ENST00000584374 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
ITGB4-211ENST00000584374 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
ITGB4-211ENST00000584374 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
ITGB4-211ENST00000584374 LOC105371267A0A1B0GV96 52 aa10.98□□□□□ -0.65
ITGB4-211ENST00000584374 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
ITGB4-211ENST00000584374 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
ITGB4-211ENST00000584374 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
ITGB4-211ENST00000584374 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
ITGB4-211ENST00000584374 LOC107984640A0A0U1RRK4 108 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 EPM2AB3EWF7 344 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 SMR3BP02814 79 aaPredicted RBP10.97□□□□□ -0.65
ITGB4-211ENST00000584374 SLPIP03973 132 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 SMIM6P0DI80 62 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 TSPEAR-AS2P59090 65 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 CIRBPQ14011 172 aaKnown RBP10.97□□□□□ -0.65
ITGB4-211ENST00000584374 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
ITGB4-211ENST00000584374 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
ITGB4-211ENST00000584374 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
ITGB4-211ENST00000584374 RPL18AQ02543 176 aaKnown RBP10.96□□□□□ -0.65
ITGB4-211ENST00000584374 Q5VSD8 79 aa10.96□□□□□ -0.65
ITGB4-211ENST00000584374 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
ITGB4-211ENST00000584374 COX17Q14061 63 aa10.95□□□□□ -0.66
ITGB4-211ENST00000584374 ERG28Q9UKR5 140 aa10.95□□□□□ -0.66
ITGB4-211ENST00000584374 NDUFC2-KCTD14E9PQ53 114 aa10.94□□□□□ -0.66
ITGB4-211ENST00000584374 PFN2P35080 140 aa10.94□□□□□ -0.66
ITGB4-211ENST00000584374 LINC00158P58513 81 aa10.94□□□□□ -0.66
ITGB4-211ENST00000584374 GAGE2BQ13066 116 aa10.92□□□□□ -0.66
ITGB4-211ENST00000584374 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
ITGB4-211ENST00000584374 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
ITGB4-211ENST00000584374 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
ITGB4-211ENST00000584374 SCXQ7RTU7 201 aa10.91□□□□□ -0.66
ITGB4-211ENST00000584374 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
ITGB4-211ENST00000584374 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
ITGB4-211ENST00000584374 A0A0J9YXY3 114 aa10.9□□□□□ -0.66
ITGB4-211ENST00000584374 COX8AP10176 69 aa10.9□□□□□ -0.66
ITGB4-211ENST00000584374 GAGE2EQ4V326 116 aa10.9□□□□□ -0.66
ITGB4-211ENST00000584374 TTTY13Q9BZ97 58 aa10.9□□□□□ -0.66
ITGB4-211ENST00000584374 GAGE2DQ9UEU5 116 aa10.9□□□□□ -0.66
ITGB4-211ENST00000584374 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
ITGB4-211ENST00000584374 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
ITGB4-211ENST00000584374 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
ITGB4-211ENST00000584374 SMIM13P0DJ93 91 aa10.89□□□□□ -0.67
ITGB4-211ENST00000584374 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
ITGB4-211ENST00000584374 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
ITGB4-211ENST00000584374 C14orf144Q96I85 54 aa10.88□□□□□ -0.67
ITGB4-211ENST00000584374 MIEN1Q9BRT3 115 aa10.88□□□□□ -0.67
ITGB4-211ENST00000584374 TIMM17BO60830 172 aa10.87□□□□□ -0.67
ITGB4-211ENST00000584374 PTTG1IPP53801 180 aa10.87□□□□□ -0.67
ITGB4-211ENST00000584374 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
ITGB4-211ENST00000584374 COPS9Q8WXC6 57 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms