RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PCP2Q8IVA1 136 aa10.98□□□□□ -0.65
CDK5RAP3-230ENST00000584042 A0A087WTM6 91 aa10.97□□□□□ -0.65
CDK5RAP3-230ENST00000584042 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
CDK5RAP3-230ENST00000584042 ZNF815PA8K554 130 aa10.97□□□□□ -0.65
CDK5RAP3-230ENST00000584042 RTL8CO15255 209 aa10.97□□□□□ -0.65
CDK5RAP3-230ENST00000584042 DLEU1O43261 78 aa10.96□□□□□ -0.65
CDK5RAP3-230ENST00000584042 CKS1BP61024 79 aa10.96□□□□□ -0.65
CDK5RAP3-230ENST00000584042 HERV-K104P63124 156 aa10.96□□□□□ -0.65
CDK5RAP3-230ENST00000584042 TTTY13Q9BZ97 58 aa10.96□□□□□ -0.65
CDK5RAP3-230ENST00000584042 BOD1L2Q8IYS8 172 aa10.95□□□□□ -0.66
CDK5RAP3-230ENST00000584042 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
CDK5RAP3-230ENST00000584042 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
CDK5RAP3-230ENST00000584042 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
CDK5RAP3-230ENST00000584042 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
CDK5RAP3-230ENST00000584042 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-230ENST00000584042 Q8N814 137 aa10.93□□□□□ -0.66
CDK5RAP3-230ENST00000584042 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
CDK5RAP3-230ENST00000584042 FAT2Q9NYQ8 4349 aa10.92□□□□□ -0.66
CDK5RAP3-230ENST00000584042 TRBV30A0A0K0K1B3 111 aa10.92□□□□□ -0.66
CDK5RAP3-230ENST00000584042 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
CDK5RAP3-230ENST00000584042 Q6ZRU5 148 aa10.92□□□□□ -0.66
CDK5RAP3-230ENST00000584042 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
CDK5RAP3-230ENST00000584042 A0A0J9YXY3 114 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 TNP2Q05952 138 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 C10orf25Q5T742 122 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 UNQ6190/PRO20217Q6UXQ8 127 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 UQCR10Q9UDW1 63 aa10.91□□□□□ -0.66
CDK5RAP3-230ENST00000584042 TSTD3H0UI37 97 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 EREGO14944 169 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 SLPIP03973 132 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 RNF151Q2KHN1 245 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 SCGB1D4Q6XE38 83 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
CDK5RAP3-230ENST00000584042 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 LINC00587B1AMM8 73 aa10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 TIMM17BO60830 172 aa10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 LINC00336Q6ZUF6 198 aa10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
CDK5RAP3-230ENST00000584042 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
CDK5RAP3-230ENST00000584042 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-230ENST00000584042 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
CDK5RAP3-230ENST00000584042 COX17Q14061 63 aa10.87□□□□□ -0.67
CDK5RAP3-230ENST00000584042 MIEN1Q9BRT3 115 aa10.87□□□□□ -0.67
CDK5RAP3-230ENST00000584042 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
CDK5RAP3-230ENST00000584042 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
CDK5RAP3-230ENST00000584042 C2orf91Q6ZV80 131 aa10.86□□□□□ -0.67
CDK5RAP3-230ENST00000584042 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
CDK5RAP3-230ENST00000584042 CIRBPQ14011 172 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-230ENST00000584042 LITAFQ99732 161 aa10.85□□□□□ -0.67
CDK5RAP3-230ENST00000584042 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-230ENST00000584042 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
CDK5RAP3-230ENST00000584042 SMIM13P0DJ93 91 aa10.83□□□□□ -0.68
CDK5RAP3-230ENST00000584042 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-230ENST00000584042 SPANXDQ9BXN6 97 aa10.83□□□□□ -0.68
CDK5RAP3-230ENST00000584042 SPANXCQ9NY87 97 aa10.83□□□□□ -0.68
CDK5RAP3-230ENST00000584042 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
CDK5RAP3-230ENST00000584042 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-230ENST00000584042 C9orf163Q8N9P6 203 aa10.82□□□□□ -0.68
CDK5RAP3-230ENST00000584042 RYR3Q15413 4870 aa10.82□□□□□ -0.68
CDK5RAP3-230ENST00000584042 PFN2P35080 140 aa10.81□□□□□ -0.68
CDK5RAP3-230ENST00000584042 LINC00158P58513 81 aa10.81□□□□□ -0.68
CDK5RAP3-230ENST00000584042 Q6ZVH6 145 aa10.81□□□□□ -0.68
CDK5RAP3-230ENST00000584042 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
CDK5RAP3-230ENST00000584042 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
CDK5RAP3-230ENST00000584042 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
CDK5RAP3-230ENST00000584042 IGLV5-52A0A0A0MRZ9 124 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 GCSHP23434 173 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 ADAMTSL4-AS1Q5T5F5 129 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 DNAH5Q8TE73 4624 aa10.79□□□□□ -0.68
CDK5RAP3-230ENST00000584042 TAL2Q16559 108 aa10.78□□□□□ -0.68
CDK5RAP3-230ENST00000584042 PKD1P98161 4303 aa10.77□□□□□ -0.68
CDK5RAP3-230ENST00000584042 DDTP30046 118 aa10.77□□□□□ -0.69
CDK5RAP3-230ENST00000584042 RPL18AQ02543 176 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-230ENST00000584042 HSD52Q0P140 79 aa10.77□□□□□ -0.69
CDK5RAP3-230ENST00000584042 DAND5Q8N907 189 aa10.77□□□□□ -0.69
CDK5RAP3-230ENST00000584042 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
CDK5RAP3-230ENST00000584042 IFITM1P13164 125 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 PTTG1IPP53801 180 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 Q6ZRP5 223 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 SND1-IT1Q9HBX3 110 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
CDK5RAP3-230ENST00000584042 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
CDK5RAP3-230ENST00000584042 LOC107984156A0A0G2JMH3 177 aa10.74□□□□□ -0.69
CDK5RAP3-230ENST00000584042 C16orf90A8MZG2 172 aa10.74□□□□□ -0.69
CDK5RAP3-230ENST00000584042 ARL17AQ8IVW1 177 aa10.74□□□□□ -0.69
CDK5RAP3-230ENST00000584042 LINC00308Q8TCZ7 52 aa10.74□□□□□ -0.69
CDK5RAP3-230ENST00000584042 GAGE2EQ4V326 116 aa10.73□□□□□ -0.69
CDK5RAP3-230ENST00000584042 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
CDK5RAP3-230ENST00000584042 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
CDK5RAP3-230ENST00000584042 GAGE2DQ9UEU5 116 aa10.73□□□□□ -0.69
CDK5RAP3-230ENST00000584042 A0A096LNI7 61 aa10.72□□□□□ -0.69
CDK5RAP3-230ENST00000584042 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDK5RAP3-230ENST00000584042 NPC2P61916 151 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms