RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
CDK5RAP3-229ENST00000583697 SEC11AP67812 179 aa5.48□□□□□ -1.53
CDK5RAP3-229ENST00000583697 PMVKQ15126 192 aa5.48□□□□□ -1.53
CDK5RAP3-229ENST00000583697 AMELXQ99217 191 aa5.48□□□□□ -1.53
CDK5RAP3-229ENST00000583697 MAP1LC3CQ9BXW4 147 aa5.48□□□□□ -1.53
CDK5RAP3-229ENST00000583697 CST9LQ9H4G1 147 aa5.48□□□□□ -1.53
CDK5RAP3-229ENST00000583697 C5orf52A6NGY3 159 aa5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 H0Y8G0 127 aa5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 MALP21145 153 aa5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 ZC2HC1BQ5TFG8 222 aa5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 GEMIN7Q9H840 131 aaKnown RBP5.47□□□□□ -1.53
CDK5RAP3-229ENST00000583697 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
CDK5RAP3-229ENST00000583697 CD164L2Q6UWJ8 174 aa5.46□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LINC00173Q6ZV60 143 aa5.46□□□□□ -1.54
CDK5RAP3-229ENST00000583697 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LINC00526Q96FQ7 95 aa5.46□□□□□ -1.54
CDK5RAP3-229ENST00000583697 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 A0A0J9YXV3 536 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 UBE2D1P51668 147 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 KRTDAPP60985 99 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 HERVK_113P63121 156 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 REG3GQ6UW15 175 aa5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
CDK5RAP3-229ENST00000583697 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 TINCRA0A1B0GVN0 87 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 SYS1-DBNDD2H3BUS1 97 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 COX7A2LO14548 114 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 GAGE2BQ13066 116 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LINC00242Q5T6M2 205 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 SPINK6Q6UWN8 80 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 Q6ZRP5 223 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LINC01600Q96MT4 127 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 CAMK2N2Q96S95 79 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
CDK5RAP3-229ENST00000583697 H3BRM9 83 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 APOMO95445 188 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C3orf79P0CE67 100 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 PTTG1IPP53801 180 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 RPL18AQ02543 176 aaKnown RBP5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 LINC00469Q8N7U9 141 aa5.43□□□□□ -1.54
CDK5RAP3-229ENST00000583697 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C20orf202A1L168 122 aa5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 F8VRH5 84 aa5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
CDK5RAP3-229ENST00000583697 DPM2O94777 84 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 IGKCP01834 107 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 IGLC3P0DOY3 106 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 PLNP26678 52 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 AKR1D1P51857 326 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 ODF1Q14990 250 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 OR10D4PQ8NGN7 298 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 PMCHL2Q9BQD1 86 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 CDKN2A-AS1Q9UH64 79 aa5.41□□□□□ -1.54
CDK5RAP3-229ENST00000583697 A0A087WZ39 114 aa5.4□□□□□ -1.54
CDK5RAP3-229ENST00000583697 SCGB1D1O95968 90 aa5.4□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
CDK5RAP3-229ENST00000583697 C11orf86A6NJI1 115 aa5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 PRSS2P07478 247 aa5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 C9orf116Q5BN46 136 aaPredicted RBP5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 LINC01545Q5VT33 79 aa5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
CDK5RAP3-229ENST00000583697 LRP2P98164 4655 aa5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 NDUFA1O15239 70 aa5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 ZNF22P17026 224 aaPredicted RBP5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
CDK5RAP3-229ENST00000583697 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 CKS1BP61024 79 aa5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 HERVK_113P61574 105 aa5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 SRSF9Q13242 221 aaKnown RBP eCLIP5.37□□□□□ -1.554e-12■□□□□ 8.5
CDK5RAP3-229ENST00000583697 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 PHF5AQ7RTV0 110 aaKnown RBP5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 PSORS1C2Q9UIG4 136 aa5.37□□□□□ -1.55
CDK5RAP3-229ENST00000583697 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
CDK5RAP3-229ENST00000583697 HSBP1L1C9JCN9 74 aa5.36□□□□□ -1.55
CDK5RAP3-229ENST00000583697 F8WDY8 70 aa5.36□□□□□ -1.55
CDK5RAP3-229ENST00000583697 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
CDK5RAP3-229ENST00000583697 RNF151Q2KHN1 245 aa5.36□□□□□ -1.55
CDK5RAP3-229ENST00000583697 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 JOSD1Q15040 202 aaPredicted RBP5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 FAM19A5Q7Z5A7 132 aaPredicted RBP5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 Q8IZM0 81 aa5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
CDK5RAP3-229ENST00000583697 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
CDK5RAP3-229ENST00000583697 LEPROTO15243 131 aa5.34□□□□□ -1.55
CDK5RAP3-229ENST00000583697 DIRC1Q969H9 104 aa5.34□□□□□ -1.55
CDK5RAP3-229ENST00000583697 PLEKHB2Q96CS7 222 aa5.34□□□□□ -1.55
CDK5RAP3-229ENST00000583697 IGLV5-39A0A0G2JS06 123 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms